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IDSAVERM_1048 TypeCDS
From1323943 nt length921
To1324863 aa length306
Gene pI5.32
Definitionputative DNA-binding protein M.W (Da)34637
NotePF01381: Helix-turn-helix AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_6838 putative DNA-binding protein4852.0e-175

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain30-8656.52.5e-15

HTH_31Helix-turn-helix36-8634.91.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055490926.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13850.0e+00
WP_030605033.1 helix-turn-helix domain-containing protein [Streptomyces ful... 13680.0e+00
WP_205380840.1 helix-turn-helix domain-containing protein [Streptomyces act... 13630.0e+00
WP_142233881.1 helix-turn-helix domain-containing protein [Streptomyces cal... 13520.0e+00
WP_188184352.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13510.0e+00
WP_142197244.1 helix-turn-helix domain-containing protein [Streptomyces cal... 13510.0e+00
WP_152887437.1 helix-turn-helix domain-containing protein [Streptomyces adu... 13500.0e+00
WP_100571869.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13500.0e+00
GAT80662.1 DNA-binding protein [Streptomyces sp. F-3] 13490.0e+00
WP_164430996.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13490.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1697 Seems to have no N-terminal signal seq.