| ID | SAVERM_1120
| Type | CDS
|
| From | 1406389
| nt length | 612
|
| To | 1405778
| aa length | 203
|
| Gene |
| pI | 11.99
|
| Definition | putative membrane protein
| M.W (Da) | 20814
|
| Note | PF01810: LysE type translocator
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7308 putative membrane transport protein | 301 | 3.0e-106
|
| sgr | SGR_6888 putative LysE-type translocator | 286 | 2.0e-100
|
| sam | SAM23877_0902 conserved membrane protein of unknown function | 307 | 2.0e-108
|
| scab | SCAB85751 putative LysE-type translocator | 284 | 2.0e-99
|
| nfar | nfa1450 transporter | 276 | 9.1e-76
|
| mtub | gi|15609123 PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv] | 196 | 9.3e-52
|
| cglu | gi|19552483 COG1279:Lysine efflux permease [Corynebacterium glutamicum] | 112 | 9.5e-27
|
| bsub | BG13100 yisU; LysE subfamily of amino-acid-efflux transporter | 65 | 2.2e-12
|
| ecoli | gi|16130824 arginine exporter protein [Escherichia coli K12] | 110 | 6.7e-26
|
| paer | PA4365 [gene=PA4365] [prot=probable transporter] [comment=PA4365] | 154 | 7.1e-39
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| LysE | 1 | LysE type translocator | 16-200 | 130.7 | 4.2e-38
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_033280847.1 | LysE/ArgO family amino acid transporter [Streptomyces sp. NR...
| 620 | 2.6e-79 |
| WP_189233362.1 | LysE/ArgO family amino acid transporter [Streptomyces flaveo...
| 615 | 1.7e-78 |
| GGQ89506.1 | amino acid transporter [Streptomyces flaveolus]
| 615 | 2.6e-78 |
| WP_073732106.1 | LysE/ArgO family amino acid transporter [Streptomyces sp. CB...
| 613 | 3.1e-78 |
| NGO10624.1 | amino acid transporter [Streptomyces scabichelini]
| 613 | 3.2e-78 |
| WP_161168913.1 | LysE/ArgO family amino acid transporter [Streptomyces sp. SI...
| 612 | 4.8e-78 |
|
| 612 | 5.1e-78 |
| WP_019069238.1 | LysE family transporter [Streptomyces hokutonensis]
| 612 | 5.2e-78 |
|
| 611 | 5.9e-78 |
| WP_019057042.1 | LysE/ArgO family amino acid transporter [Streptomyces prunic...
| 611 | 7.4e-78 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4312 | Seems to have an uncleavable N-term signal seq
|