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IDSAVERM_1148 TypeCDS
From1437455 nt length456
To1437000 aa length151
GenepopR pI11.62
Definitionputative DNA-binding protein M.W (Da)16262
NotePF01381: Helix-turn-helix AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categoryregulation


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO7279 possible DNA-binding protein1455.0e-46
sgrSGR_2603 putative DNA-binding protein985.0e-27
samSAM23877_0935 putative DNA-binding protein1296.0e-40
scabSCAB85571 putative DNA-binding protein912.0e-25
nfarnfa11730 transcriptional regulator781.7e-16

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain60-11542.65.3e-11

HTH_31Helix-turn-helix63-11739.44.3e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_171033259.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 2732.4e-28
SNX56236.1 helix-turn-helix protein [Streptomyces sp. TLI_55] 2664.0e-27
OSZ56656.1 transcriptional regulator [Streptomyces pharetrae CZA14] 2645.7e-27
OKJ75788.1 DNA-binding protein [Streptomyces sp. TSRI0107] 2639.9e-27
WP_075025900.1 helix-turn-helix domain-containing protein [Streptomyces mir... 2641.0e-26
NMI56092.... 2621.8e-26
WP_059197080.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 2602.1e-26
WP_208897675.1 helix-turn-helix domain-containing protein [Streptomyces inc... 2602.1e-26
WP_189942357.1 helix-turn-helix transcriptional regulator [Streptomyces aur... 2583.2e-26
QDN74361.1 helix-turn-helix domain-containing protein [Streptomyces sp. S1A1... 2603.4e-26

PSORT result

LocalizationCertaintyPSORT said
membrane0.1128 Seems to have no N-terminal signal seq.