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IDSAVERM_1214 TypeCDS
From1507527 nt length1044
To1506484 aa length347
GenelitR pI11.07
Definitionputative MerR-family transcriptional regulator M.W (Da)36320
Noteprobably repressor/activator for carotenoid biosynthesis, PF00376: MerR family regulatory protein AseI frg.U
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0193 putative DNA-binding regulator3604.0e-125
sgrSGR_817 putative MerR-family transcriptional regulator3123.0e-106
samSAM23877_7076 putative DNA-binding regulator3332.0e-114
scabSCAB5421 putative MerR-family transcriptional regulator3522.0e-121
saceSACE_6713 DNA-binding regulator1398.0e-39
nfarnfa30640 transcriptional regulator1487.9e-37
ecoligi|16129125 putative transcriptional regulator [Escherichia coli K12]531.5e-08

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MerR_11MerR HTH family regulatory protein27-9349.14e-13

MerR1MerR family regulatory protein27-6332.64.4e-08

B12-binding1B12 binding domain220-31231.81.1e-07

B12-binding_21B12 binding domain134-20431.91.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_007379838.1 MULTISPECIES: MerR family transcriptional regulator [Strepto... 12056.6e-164
WP_144314961.1 MerR family transcriptional regulator [Streptomyces sp. RLB3... 12013.8e-163
WP_097283263.1 MerR family transcriptional regulator [Streptomyces sp. OK22... 12014.5e-163
WP_164373612.1 MerR family transcriptional regulator [Streptomyces sp. SID1... 11971.1e-162
WP_143600490.1 MULTISPECIES: MerR family transcriptional regulator [unclass... 11981.2e-162
WP_143612581.1 MULTISPECIES: MerR family transcriptional regulator [unclass... 11971.9e-162
WP_212671601.1 MerR family transcriptional regulator [Streptomyces sp. A2-1... 11953.5e-162
WP_067377623.1 MerR family transcriptional regulator [Streptomyces olivochr... 11936.6e-162
WP_153292383.1 MerR family transcriptional regulator [Streptomyces fagopyri... 11892.3e-161
WP_217566914.1 MerR family transcriptional regulator [Streptomyces sp. Gbtc... 11893.2e-161

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2896 Seems to have no N-terminal signal seq.