| ID | SAVERM_1291
| Type | CDS
|
| From | 1599819
| nt length | 546
|
| To | 1599274
| aa length | 181
|
| Gene |
| pI | 6.64
|
| Definition | putative PadR-like family transcriptional regulator
| M.W (Da) | 20727
|
| Note | PF03551: Transcriptional regulator PadR-like family
| AseI frg. | P
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7067 hypothetical protein | 314 | 5.0e-112
|
| sgr | SGR_826 putative PadR-like family transcriptional regulator | 258 | 7.0e-90
|
| sam | SAM23877_1022 putative PadR-like family transcriptional regulator | 314 | 6.0e-112
|
| scab | SCAB83741 putative PadR-like family transcriptional regulator | 305 | 5.0e-108
|
| sace | SACE_4166 putative transcriptional regulator | 130 | 2.0e-39
|
| nfar | nfa12910 transcriptional regulator | 125 | 2.8e-30
|
| mtub | gi|15608316 hypothetical protein Rv1176c [Mycobacterium tuberculosis H37Rv] | 115 | 1.7e-27
|
| bsub | BG12220 padR, yfiO; transcriptional repressor of padC | 78 | 2.7e-16
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Vir_act_alpha_C | 1 | Virulence activator alpha C-term | 92-174 | 79.7 | 1.8e-22
|
| PadR | 1 | Transcriptional regulator PadR-like family | 7-80 | 43.5 | 2.2e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_103550369.1 | PadR family transcriptional regulator [Streptomyces populi] ...
| 778 | 5.7e-104 |
| WP_152772646.1 | PadR family transcriptional regulator [Streptomyces spongiae...
| 771 | 6.8e-103 |
| WP_190228566.1 | PadR family transcriptional regulator [Streptomyces umbrinus...
| 771 | 7.2e-103 |
| WP_189183852.1 | PadR family transcriptional regulator [Streptomyces albiflav...
| 769 | 1.4e-102 |
| WP_189838793.1 | PadR family transcriptional regulator [Streptomyces umbrinus...
| 768 | 2.0e-102 |
| WP_151468882.1 | PadR family transcriptional regulator [Streptomyces triticir...
| 767 | 2.2e-102 |
| WP_044474078.1 | MULTISPECIES: PadR family transcriptional regulator [Strepto...
| 767 | 2.5e-102 |
| WP_055612468.1 | PadR family transcriptional regulator [Streptomyces phaeochr...
| 765 | 5.2e-102 |
| WP_030957881.1 | MULTISPECIES: PadR family transcriptional regulator [unclass...
| 762 | 1.4e-101 |
| WP_062697223.1 | PadR family transcriptional regulator [Streptomyces regalis]...
| 760 | 3.0e-101 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0706 | Seems to have no N-terminal signal seq.
|