| ID | SAVERM_1540
| Type | CDS
|
| From | 1884200
| nt length | 573
|
| To | 1883628
| aa length | 190
|
| Gene | pucE
| pI | 4.83
|
| Definition | putative xanthine dehydrogenase
| M.W (Da) | 19707
|
| Note | PF01799: [2Fe-2S] binding domain
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1134 putative oxidoreductase iron-sulphur binding subunit | 327 | 2.0e-116
|
| sgr | SGR_6436 putative xanthine dehydrogenase | 326 | 2.0e-116
|
| sam | SAM23877_1216 putative oxidoreductase, iron-sulfur binding subunit | 310 | 7.0e-110
|
| scab | SCAB82091 putative xanthine dehydrogenase | 322 | 2.0e-114
|
| sace | SACE_4466 oxidoreductase, iron-sulfur subunit | 207 | 3.0e-69
|
| bsub | BG13988 pucE, yurB; xanthine dehydrogenase | 116 | 7.5e-28
|
| ecoli | gi|16128271 putative oxidoreductase, Fe-S subunit [Escherichia coli K12] | 205 | 1.8e-54
|
| paer | PA1931 [gene=PA1931] [prot=probable ferredoxin] [comment=PA1931] | 177 | 5.4e-46
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Fer2_2 | 1 | [2Fe-2S] binding domain | 79-169 | 101.4 | 1.9e-29
|
| Fer2 | 1 | 2Fe-2S iron-sulfur cluster binding domain | 12-59 | 36.1 | 4.4e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| SED63916.1 | xanthine dehydrogenase YagT iron-sulfur-binding subunit [Strepto...
| 841 | 5.7e-113 |
| WP_135331267.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces sp....
| 838 | 5.7e-113 |
| WP_031055651.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces och...
| 837 | 6.4e-113 |
| WP_088801237.1 | MULTISPECIES: 2Fe-2S iron-sulfur cluster-binding protein [un...
| 840 | 6.8e-113 |
| WP_028800273.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces sp....
| 839 | 7.1e-113 |
| GFE06441.1 | oxidoreductase [Streptomyces caniferus]
| 839 | 8.7e-113 |
| WP_030266737.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces vio...
| 833 | 2.4e-112 |
| WP_073734044.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces sp....
| 834 | 2.5e-112 |
| WP_083109012.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces gil...
| 835 | 2.6e-112 |
| WP_101387146.1 | 2Fe-2S iron-sulfur cluster-binding protein [Streptomyces sp....
| 833 | 3.1e-112 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2361 | Seems to have no N-terminal signal seq.
|