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IDSAVERM_1564 TypeCDS
From1927862 nt length1800
To1926063 aa length599
GenemsbA pI8.72
Definitionputative ABC transporter ATP-binding protein (bacterial ATP-binding cassette, subfamily B) M.W (Da)64983
NotePF00005: ABC transporter AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1144 putative ABC transporter ATP-binding protein10130.0e+00
sgrSGR_6328 putative ABC transporter ATPase and permease component9510.0e+00
samSAM23877_1227 putative ABC transporter ATP-binding protein10290.0e+00
scabSCAB80101 putative ABC transporter ATP-binding protein10060.0e+00
bsubBG12224 ygaD; multidrug resistance protein3631.5e-101

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; bsub, Bacillus subtilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region37-309117.38.5e-34

ABC_tran1ABC transporter373-522100.97.2e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_028800283.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27790.0e+00
WP_055489535.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27740.0e+00
WP_099503406.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27690.0e+00
WP_189184218.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 27650.0e+00
WP_054228897.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27620.0e+00
WP_168489719.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27610.0e+00
WP_095932677.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 27610.0e+00
WP_143612751.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27590.0e+00
WP_060895163.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 27550.0e+00
WP_075025440.1 ABC transporter ATP-binding protein/permease [Streptomyces m... 27540.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.4057 Seems to have no N-terminal signal seq.