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IDSAVERM_1569 TypeCDS
From1931874 nt length1863
To1933736 aa length620
Gene pI5
Definitionputative ABC transporter permease protein M.W (Da)65573
NotePF00664: ABC transporter transmembrane region AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1147 putative ABC transporter transmembrane subunit9630.0e+00
sgrSGR_6324 putative ABC transporter ATPase and permease component8290.0e+00
samSAM23877_1230 putative ABC transporter transmembrane subunit9430.0e+00
scabSCAB80051 putative ABC transporter permease protein9090.0e+00
cglugi|19552178 COG1132:ABC-type multidrug/protein/lipid transport system, ATPase component [Corynebacterium glutamicum]1562.3e-39

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_membrane1ABC transporter transmembrane region52-30283.81.4e-23

ABC_tran1ABC transporter391-50445.59.5e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_099503412.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 20300.0e+00
WP_212727807.1 ABC transporter ATP-binding protein/permease [Streptomyces m... 20190.0e+00
WP_168489721.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 20170.0e+00
QIY94295.1 ABC transporter ATP-binding protein [Streptomyces sp. S1D4-11] 20140.0e+00
WP_189184222.1 ABC transporter ATP-binding protein/permease [Streptomyces a... 20110.0e+00
WP_168526875.1 ABC transporter ATP-binding protein/permease [Streptomyces s... 19860.0e+00
WP_153292064.1 ABC transporter ATP-binding protein/permease [Streptomyces f... 19840.0e+00
WP_190169192.1 ABC transporter ATP-binding protein/permease [Streptomyces m... 19840.0e+00
WP_067372620.1 ABC transporter ATP-binding protein/permease [Streptomyces o... 19780.0e+00
WP_044473860.1 MULTISPECIES: ABC transporter ATP-binding protein/permease [... 19780.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.5394 Seems to have no N-terminal signal seq.