| ID | SAVERM_1573
| Type | CDS
|
| From | 1937865
| nt length | 2661
|
| To | 1940525
| aa length | 886
|
| Gene |
| pI | 4.96
|
| Definition | putative ATP-dependent helicase
| M.W (Da) | 98482
|
| Note | PF00270: DEAD/DEAH box helicase
| AseI frg. | C
|
| SignalP v.4.0 | Signal peptide | plot
| Category | DNA modification & repair
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO1152 putative helicase | 1550 | 0.0e+00
|
| sgr | SGR_6318 putative ATP-dependent helicase | 1504 | 0.0e+00
|
| sam | SAM23877_1235 Helicase | 1537 | 0.0e+00
|
| scab | SCAB80011 putative ATP-dependent helicase | 1623 | 0.0e+00
|
| sace | SACE_5630 DEAD/DEAH box helicase-like | 1211 | 0.0e+00
|
| nfar | nfa37840 helicase | 1109 | 0.0e+00
|
| cglu | gi|19553128 COG0513:Superfamily II DNA and RNA helicases [Corynebacterium glutamicum] | 951 | 0.0e+00
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3516 | 1 | Domain of unknown function (DUF3516) | 423-883 | 730.3 | 9.8e-220
|
| DEAD | 1 | DEAD/DEAH box helicase | 82-227 | 40.8 | 1.7e-10
|
| Helicase_C | 1 | Helicase conserved C-terminal domain | 324-412 | 27.2 | 3.5e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1044 | Seems to have a cleavable N-term signal seq.
|