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IDSAVERM_1593 TypeCDS
From1957682 nt length1278
To1958959 aa length425
Gene pI4.61
Definitionhypothetical protein M.W (Da)45419
NotePF04434: SWIM zinc finger AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO1168 hypothetical protein5130.0e+00
sgrSGR_348 conserved hypothetical protein4396.0e-153
samSAM23877_1254 hypothetical protein4843.0e-171
scabSCAB79881 hypothetical protein4724.0e-166
saceSACE_7222 SWIM zinc finger domain protein1333.0e-37

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189184249.1 SWF or SNF family helicase [Streptomyces albiflavescens] >db... 11662.3e-155
WP_217456568.1 SWF or SNF family helicase [Streptomyces sp. BV286] >lcl 11637.5e-155
WP_194048577.1 SWF or SNF family helicase [Streptomyces ferrugineus] >gb 11448.0e-152
WP_189774214.1 SWF or SNF family helicase [Streptomyces tauricus] >dbj 11438.8e-152
WP_232649952.1 SWF or SNF family helicase [Streptomyces sp. NR30] >lcl 11421.0e-151
WP_093903845.1 SWF or SNF family helicase [Streptomyces sp. cf386] >emb 11411.8e-151
WP_165254330.1 SWF or SNF family helicase [Streptomyces scabichelini] >gb 11402.5e-151
WP_067022696.1 SWF or SNF family helicase [Streptomyces dysideae] >gb 11395.5e-151
WP_190072140.1 SWF or SNF family helicase [Streptomyces lanatus] >dbj 11368.8e-151
WP_189843772.1 SWF or SNF family helicase [Streptomyces umbrinus] >dbj 11351.3e-150

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2531 Seems to have no N-terminal signal seq.