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IDSAVERM_1644 TypeCDS
From2013918 nt length627
To2013292 aa length208
Gene pI6.8
Definitionputative regulatory protein M.W (Da)21985
NotePF01381: Helix-turn-helix AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6770 putative DNA-binding protein3001.0e-105
sgrSGR_958 putative transcriptional regulator2659.0e-92
samSAM23877_6420 DNA-binding protein3003.0e-105
scabSCAB12891 putative regulatory protein3252.0e-115
paerPA0225 [gene=PA0225] [prot=probable transcriptional regulator] [comment=PA0225]784.0e-16

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7363.61.5e-17

Cupin_21Cupin domain114-18153.41.4e-14

HTH_31Helix-turn-helix19-7349.13.9e-13

HTH_191Helix-turn-helix domain19-7433.33.4e-08

AraC_binding1AraC-like ligand binding domain127-18026.45e-06

HTH_261Cro/C1-type HTH DNA-binding domain34-7423.65e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189185867.1 XRE family transcriptional regulator [Streptomyces albiflave... 8141.8e-108
WP_055494171.1 XRE family transcriptional regulator [Streptomyces sp. TP-A0... 8122.5e-108
WP_131564783.1 XRE family transcriptional regulator [Streptomyces sp. KM273... 8002.1e-106
WP_189870498.1 XRE family transcriptional regulator [Streptomyces viridivio... 8002.2e-106
WP_067361251.1 XRE family transcriptional regulator [Streptomyces olivochro... 7983.9e-106
WP_094217521.1 XRE family transcriptional regulator [Streptomyces diastatoc... 7974.2e-106
GAX49062.1 DNA-binding protein [Streptomyces olivochromogenes] 7984.9e-106
WP_150950514.1 XRE family transcriptional regulator [Streptomyces luteolifu... 7975.6e-106
WP_152864365.1 XRE family transcriptional regulator [Streptomyces acidicola... 7931.8e-105
GHE48487.1 DNA-binding protein [Streptomyces capitiformicae] 7923.1e-105

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2241 Seems to have no N-terminal signal seq.