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IDSAVERM_1654 TypeCDS
From2026846 nt length903
To2025944 aa length300
GenehopE pI4.98
Definitionsqualene/phytoene synthase M.W (Da)32519
Notesqualene/hopene gene cluster, sqs2, PF00494: Squalene/phytoene synthase AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categorymetabolism of lipids


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6759 putative phytoene synthase4793.0e-173
sgrSGR_966 putative squalene/phytoene synthase4384.0e-157
samSAM23877_6410 putative phytoene synthase5000.0e+00
scabSCAB13001 squalene/phytoene synthase4371.0e-156
saceSACE_4331 squalene/phytoene synthase2039.0e-65

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase19-285236.82.6e-70

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_189839540.1 squalene synthase HpnC [Streptomyces umbrinus] >dbj 11741.6e-160
WP_190227419.1 squalene synthase HpnC [Streptomyces umbrinus] >dbj 11691.2e-159
WP_200394687.1 squalene synthase HpnC [Streptomyces sp. ZYC-3] >gb 11611.5e-158
WP_190849573.1 squalene synthase HpnC [Streptomyces glomeroaurantiacus] >db... 11593.2e-158
WP_055509558.1 squalene synthase HpnC [Streptomyces aurantiacus] 11561.2e-157
WP_189185877.1 squalene synthase HpnC [Streptomyces albiflavescens] >dbj 11551.5e-157
WP_189324568.1 squalene synthase HpnC [Streptomyces flaveus] >dbj 11541.9e-157
WP_168531191.1 squalene synthase HpnC [Streptomyces sp. RPA4-2] >gb 11542.3e-157
WP_033327202.1 squalene synthase HpnC [Streptomyces yerevanensis] 11524.8e-157
WP_143634323.1 squalene synthase HpnC [Streptomyces sp. IB201691-2A2] >lcl 11515.3e-157

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.3838 Seems to have no N-terminal signal seq.