| ID | SAVERM_1655
| Type | CDS
|
| From | 2027986
| nt length | 780
|
| To | 2027207
| aa length | 259
|
| Gene | tagH1
| pI | 10
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 28493
|
| Note | PF00005: ABC transporter
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6758 putative ABC transporter ATP-binding component | 479 | 9.0e-175
|
| sgr | SGR_967 putative ABC transporter ATP-binding protein | 448 | 3.0e-162
|
| sam | SAM23877_6408 ABC transporter ATP-binding protein | 495 | 0.0e+00
|
| scab | SCAB13011 putative ABC transporter ATP-binding protein | 488 | 2.0e-178
|
| sace | SACE_0200 putative ABC transport system, ATP-binding protein | 131 | 9.0e-38
|
| nfar | nfa2180 ABC transporter ATP-binding protein | 150 | 1.4e-37
|
| mtub | gi|15610917 PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER RFBE [Mycobacterium tuberculosis H37Rv] | 138 | 4.2e-34
|
| cglu | gi|19551451 COG1134:ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Corynebacterium glutamicum] | 137 | 5.1e-34
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 57-190 | 64.7 | 1.1e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| NGO74865.1 | ABC transporter ATP-binding protein [Streptomyces mesophilus]
| 1254 | 4.6e-174 |
| WP_232789729.1 | ABC transporter ATP-binding protein [Streptomyces jeddahensi...
| 1251 | 1.7e-173 |
| WP_048580880.1 | ABC transporter ATP-binding protein [Streptomyces viridochro...
| 1249 | 3.0e-173 |
|
| 1244 | 2.0e-172 |
| WP_217236522.1 | ABC transporter ATP-binding protein [Streptomyces sp. AC555_...
| 1243 | 2.5e-172 |
| QIY99726.1 | ABC transporter ATP-binding protein [Streptomyces sp. S1D4-11]
| 1242 | 2.9e-172 |
|
| 1241 | 4.3e-172 |
| WP_099919499.1 | ABC transporter ATP-binding protein [Streptomyces sp. GbtcB7...
| 1241 | 5.1e-172 |
| WP_126898851.1 | ABC transporter ATP-binding protein [Streptomyces sp. WAC 01...
| 1241 | 5.7e-172 |
| WP_190168312.1 | ABC transporter ATP-binding protein [Streptomyces mirabilis]...
| 1240 | 7.5e-172 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1936 | Seems to have no N-terminal signal seq.
|