| ID | SAVERM_1683
| Type | CDS
|
| From | 2061478
| nt length | 1176
|
| To | 2062653
| aa length | 391
|
| Gene |
| pI | 9.38
|
| Definition | hypothetical protein
| M.W (Da) | 42006
|
| Note | PF03435: Saccharopine dehydrogenase
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6729 conserved hypothetical protein | 551 | 0.0e+00
|
| sgr | SGR_997 conserved hypothetical protein | 546 | 0.0e+00
|
| sam | SAM23877_6381 hypothetical protein | 585 | 0.0e+00
|
| scab | SCAB13381 hypothetical protein | 595 | 0.0e+00
|
| sace | SACE_1566 saccharopine dehydrogenase | 69 | 1.0e-13
|
| nfar | nfa52130 hypothetical protein | 234 | 9.7e-63
|
| mtub | gi|15609586 hypothetical protein Rv2449c [Mycobacterium tuberculosis H37Rv] | 225 | 3.4e-60
|
| paer | PA4362 [gene=PA4362] [prot=hypothetical protein] [comment=PA4362] | 76 | 3.5e-15
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Sacchrp_dh_NADP | 1 | Saccharopine dehydrogenase NADP binding domain | 12-134 | 52.0 | 7.4e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059130987.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1515 | 0.0e+00 |
| WP_189185911.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1509 | 0.0e+00 |
| WP_164371420.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1489 | 0.0e+00 |
| WP_099502398.1 | MULTISPECIES: saccharopine dehydrogenase NADP-binding domain...
| 1469 | 0.0e+00 |
| WP_194081727.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1468 | 0.0e+00 |
| WP_126275433.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1468 | 0.0e+00 |
| WP_150950477.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1467 | 0.0e+00 |
| OPG08434.1 | saccharopine dehydrogenase [Streptomyces sp. GKU 895]
| 1467 | 0.0e+00 |
| WP_097271043.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1466 | 0.0e+00 |
| WP_109494663.1 | saccharopine dehydrogenase NADP-binding domain-containing pr...
| 1464 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1871 | Seems to have a cleavable N-term signal seq.
|