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IDSAVERM_1765 TypeCDS
From2157453 nt length897
To2156557 aa length298
Gene pI8.15
Definitionputative AraC-family transcriptional regulator M.W (Da)33227
NotePF02311: AraC-like ligand binding domain AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6664 putative transcriptional regulator4813.0e-174
samSAM23877_6323 Transcriptional regulator4823.0e-174
scabSCAB9901 putative AraC-family transcriptional regulator1412.0e-40
ecoligi|16131745 positive regulator for rhaBAD operon [Escherichia coli K12]715.9e-14
paerPA0248 [gene=PA0248] [prot=probable transcriptional regulator] [comment=PA0248]701.8e-13

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain217-29573.61e-20

AraC_binding1AraC-like ligand binding domain50-15057.71.1e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093630232.1 AraC family transcriptional regulator [Streptomyces sp. 3213... 11593.5e-158
WP_019069888.1 AraC family transcriptional regulator [Streptomyces hokutone... 11568.0e-158
WP_168531053.1 AraC family transcriptional regulator [Streptomyces sp. RPA4... 11551.4e-157
WP_093497919.1 AraC family transcriptional regulator [Streptomyces sp. Ag10... 11491.1e-156
WP_043671913.1 AraC family transcriptional regulator [Streptomyces xylophag... 11472.0e-156
WP_153287712.1 AraC family transcriptional regulator [Streptomyces fagopyri... 11472.7e-156
WP_200688711.1 AraC family transcriptional regulator [Streptomyces sp. MBT6... 11454.3e-156
WP_201054850.1 AraC family transcriptional regulator [Streptomyces sp. MBT5... 11446.4e-156
WP_093898089.1 AraC family transcriptional regulator [Streptomyces sp. Ncos... 11441.0e-155
WP_234520198.1 AraC family transcriptional regulator [Streptomyces glomerat... 11393.1e-155

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1260 Seems to have no N-terminal signal seq.