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IDSAVERM_18 TypeCDS
From23675 nt length885
To24559 aa length294
Gene pI12.29
Definitionputative IS5 family IS1648-like transposase M.W (Da)33752
NoteIS5 family (23622..25034). Inverted repeat sequence (16/18 bp). Target sequence (CTAG). AseI frg.W
SignalP v.4.0Non-secretory protein | plot Categorytransposon & IS

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6397 putative IS1648 transposase2137.0e-71
sgrSGR_7021t putative IS1647-like transposase2376.0e-78
scabSCAB14601 putative transposase2649.0e-89
saceSACE_2516 putative transposase1086.0e-30
nfarnfa13910 transposase2901.0e-79
mtubgi|15608181 PROBABLE IS LIKE-2 TRANSPOSASE [Mycobacterium tuberculosis H37Rv]1349.5e-33

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF40961Putative transposase of IS4/5 family (DUF4096)6-7797.73.1e-28

DDE_Tnp_1_21Transposase DDE domain196-29269.91.7e-19

DDE_Tnp_11Transposase DDE domain100-27750.91.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030232338.1 IS5 family transposase [Streptomyces lavendulae] >gb 13070.0e+00
WP_210985288.1 IS5 family transposase [Streptomyces sp. RK76] >lcl 13032.9e-180
WP_087773875.1 IS5 family transposase [Streptomyces sp. CS227] >gb 13015.0e-180
WP_124283637.1 IS5 family transposase [Streptomyces sp. ADI97-07] 12962.8e-179
WP_150516545.1 IS5 family transposase [Streptomyces subrutilus] >gb 12921.1e-178
WP_107426502.1 IS5 family transposase [Streptomyces sp. CS227] 12921.3e-178
WP_075737702.1 IS5 family transposase [Streptomyces acidiscabies] 12911.9e-178
WP_055601231.1 IS5 family transposase [Streptomyces aureus] 12869.4e-178
WP_093549382.1 MULTISPECIES: IS5 family transposase [unclassified Streptomy... 12841.8e-177
WP_107065476.1 IS5 family transposase [Streptomyces scabiei] 12791.3e-176

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.5623 Seems to have no N-terminal signal seq.