| ID | SAVERM_1837
| Type | CDS
|
| From | 2252632
| nt length | 849
|
| To | 2253480
| aa length | 282
|
| Gene | fdhD
| pI | 5.44
|
| Definition | putative protein associated with oxidoreductase activity
| M.W (Da) | 29767
|
| Note | PF02634: FdhD/NarQ family
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | membrane bioenergetics
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6558 putative protein associated with oxidoreductase activity | 513 | 0.0e+00
|
| sgr | SGR_1121 putative formate dehydrogenase accessory protein | 483 | 2.0e-175
|
| sam | SAM23877_6258 Protein FdhD-like protein | 508 | 0.0e+00
|
| scab | SCAB16911 putative protein associated with oxidoreductase activity | 496 | 1.0e-180
|
| sace | SACE_4508 formate dehydrogenase family accessory protein FdhD | 390 | 1.0e-138
|
| nfar | nfa13390 fdhD formate dehydrogenase accessory protein | 291 | 4.4e-80
|
| mtub | gi|15610036 formate dehydrogenase accessory protein [Mycobacterium tuberculosis H37Rv] | 298 | 2.1e-82
|
| cglu | gi|19551764 COG1526:Uncharacterized protein required for formate dehydrogenase activity [Corynebacterium glutamicum] | 249 | 1.3e-67
|
| bsub | BG10979 narQ, narAA; fdhD protein homolog | 131 | 5.1e-32
|
| ecoli | gi|16131735 formate dehydrogenase accessory protein [Escherichia coli K12] | 111 | 6.2e-26
|
| paer | PA5180 [gene=PA5180] [prot=conserved hypothetical protein] [comment=PA5180] | 112 | 4.9e-26
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| FdhD-NarQ | 1 | FdhD/NarQ family | 26-273 | 267.3 | 1.1e-79
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095937678.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1306 | 0.0e+00 |
| WP_028801793.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1302 | 1.6e-180 |
| WP_189191120.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1300 | 3.9e-180 |
| WP_055616764.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1295 | 2.3e-179 |
| WP_151478576.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1293 | 4.3e-179 |
| WP_143640897.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1290 | 1.2e-178 |
| WP_189840973.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1289 | 2.0e-178 |
| WP_107016846.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1287 | 3.9e-178 |
| WP_217453853.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1284 | 1.1e-177 |
| WP_210888260.1 | formate dehydrogenase accessory sulfurtransferase FdhD [Stre...
| 1279 | 6.4e-177 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1192 | Seems to have no N-terminal signal seq.
|