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IDSAVERM_1860 TypeCDS
From2284808 nt length858
To2285665 aa length285
Gene pI5.62
Definitionputative DNA-binding protein M.W (Da)31171
NotePF01381: Helix-turn-helix AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6539 hypothetical protein4437.0e-160
sgrSGR_1133 putative DNA-binding protein3727.0e-132
samSAM23877_6244 hypothetical protein4436.0e-160
scabSCAB17071 putative DNA-binding protein4192.0e-149
saceSACE_7094 transcriptional regulator, XRE family2572.0e-86
nfarnfa22820 DNA-binding protein2292.7e-61

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain28-8848.57.6e-13

HTH_31Helix-turn-helix33-8436.53.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GHJ99476.1 transcriptional regulator [Streptomyces sp. Y2F8-2] 10643.9e-144
WP_200417959.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10634.2e-144
WP_103841714.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10582.0e-143
WP_234515738.1 helix-turn-helix transcriptional regulator [Streptomyces glo... 10548.3e-143
WP_190168073.1 helix-turn-helix transcriptional regulator [Streptomyces mir... 10521.7e-142
WP_030607918.1 helix-turn-helix transcriptional regulator [Streptomyces ful... 10511.8e-142
WP_086729720.1 helix-turn-helix transcriptional regulator [Streptomyces car... 10522.0e-142
WP_123968561.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 10503.5e-142
WP_095851654.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 10503.8e-142
WP_141574262.1 helix-turn-helix transcriptional regulator [Streptomyces ipo... 10504.0e-142

PSORT result

LocalizationCertaintyPSORT said
Not Clear Seems to have an uncleavable N-term signal seq