| ID | SAVERM_1913
| Type | CDS
|
| From | 2342063
| nt length | 966
|
| To | 2343028
| aa length | 321
|
| Gene | citE2
| pI | 4.86
|
| Definition | putative citrate lyase beta chain
| M.W (Da) | 35197
|
| Note | PF03328: HpcH/HpaI aldolase/citrate lyase family
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6471 putative lyase | 636 | 0.0e+00
|
| sgr | SGR_1172 putative lyase | 595 | 0.0e+00
|
| sam | SAM23877_6065 Citratelyase | 641 | 0.0e+00
|
| scab | SCAB17641 putative citrate lyase beta chain | 599 | 0.0e+00
|
| sace | SACE_1042 citrate (pro-3S)-lyase beta subunit | 461 | 2.0e-165
|
| nfar | nfa47160 lyase | 440 | 9.1e-125
|
| ecoli | gi|49176036 citrate lyase beta chain (acyl lyase subunit) [Escherichia coli K12] | 139 | 2.5e-34
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; ecoli, Escherichia coli K-12;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| HpcH_HpaI | 1 | HpcH/HpaI aldolase/citrate lyase family | 12-242 | 160.4 | 3.1e-47
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2099 | Seems to have no N-terminal signal seq.
|