| ID | SAVERM_1916
| Type | CDS
|
| From | 2344940
| nt length | 648
|
| To | 2345587
| aa length | 215
|
| Gene | psd
| pI | 10.42
|
| Definition | putative phosphatidylserine decarboxylase
| M.W (Da) | 23337
|
| Note | PF02666: Phosphatidylserine decarboxylase
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of lipids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6468 conserved hypothetical protein | 410 | 1.0e-148
|
| sgr | SGR_1175 putative phosphatidylserine decarboxylase | 390 | 7.0e-141
|
| sam | SAM23877_6062 Phosphatidylserine decarboxylase proenzyme | 407 | 1.0e-147
|
| scab | SCAB17671 putative phosphatidylserine decarboxylase | 337 | 2.0e-120
|
| sace | SACE_0521 phosphatidylserine decarboxylase proenzyme | 117 | 3.0e-33
|
| nfar | nfa52810 psd phosphatidylserine decarboxylase | 108 | 4.7e-25
|
| mtub | gi|15607578 phosphatidylserine decarboxylase [Mycobacterium tuberculosis H37Rv] | 111 | 3.3e-26
|
| ecoli | gi|16131985 phosphatidylserine decarboxylase [Escherichia coli K12] | 37 | 7.8e-04
|
| paer | PA4957 [gene=psd] [prot=phosphatidylserine decarboxylase] [comment=PA4957] | 46 | 2.3e-06
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PS_Dcarbxylase | 1 | Phosphatidylserine decarboxylase | 56-209 | 115.3 | 2.3e-33
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_078943298.1 | MULTISPECIES: phosphatidylserine decarboxylase [Streptomyces...
| 1023 | 3.4e-140 |
| WP_200418028.1 | phosphatidylserine decarboxylase [Streptomyces sp. Y2F8-2] >...
| 1015 | 5.4e-139 |
| WP_028801875.1 | MULTISPECIES: phosphatidylserine decarboxylase [unclassified...
| 1014 | 6.2e-139 |
| WP_079064788.1 | phosphatidylserine decarboxylase [Streptomyces olivochromoge...
| 1014 | 6.3e-139 |
| WP_152889562.1 | phosphatidylserine decarboxylase [Streptomyces adustus] >gb
| 1013 | 9.2e-139 |
| WP_078935522.1 | MULTISPECIES: phosphatidylserine decarboxylase [Streptomyces...
| 1011 | 1.9e-138 |
| WP_095851695.1 | MULTISPECIES: phosphatidylserine decarboxylase [Streptomyces...
| 1011 | 2.0e-138 |
| WP_099498463.1 | MULTISPECIES: phosphatidylserine decarboxylase [Streptomyces...
| 1011 | 2.0e-138 |
| WP_220296381.1 | phosphatidylserine decarboxylase [Streptomyces sp. MBT84] >l...
| 1010 | 2.4e-138 |
| WP_075029692.1 | phosphatidylserine decarboxylase [Streptomyces mirabilis] >e...
| 1009 | 3.7e-138 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1808 | Seems to have no N-terminal signal seq.
|