| ID | SAVERM_2019
| Type | CDS
|
| From | 2461402
| nt length | 408
|
| To | 2460995
| aa length | 135
|
| Gene |
| pI | 6.51
|
| Definition | hypothetical protein
| M.W (Da) | 14140
|
| Note | PF00576: Transthyretin precursor (formerly prealbumin)
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6210 hypothetical protein | 171 | 9.0e-57
|
| sgr | SGR_1310 conserved hypothetical protein | 190 | 2.0e-64
|
| sam | SAM23877_5950 Hydroxyisourate hydrolase | 169 | 3.0e-56
|
| scab | SCAB18531 hypothetical protein | 202 | 5.0e-69
|
| sace | SACE_6735 transthyretin | 97 | 5.0e-28
|
| nfar | nfa52430 hypothetical protein | 91 | 2.7e-20
|
| bsub | BG13987 pucM, yunM; uricase | 61 | 1.6e-11
|
| ecoli | gi|16129916 transthyretin-like protein [Escherichia coli K12] | 79 | 8.3e-17
|
| paer | PA1518 [gene=PA1518] [prot=conserved hypothetical protein] [comment=PA1518] | 58 | 2.6e-10
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Transthyretin | 1 | HIUase/Transthyretin family | 9-134 | 122.3 | 1.3e-35
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_186282137.1 | hydroxyisourate hydrolase [Streptomyces sp. PSKA01] >lcl
| 571 | 5.0e-74 |
| WP_031134194.1 | MULTISPECIES: hydroxyisourate hydrolase [Streptomyces] >gb
| 566 | 3.1e-73 |
| WP_217207347.1 | hydroxyisourate hydrolase [Streptomyces sp. AC550_RSS872]
| 559 | 4.6e-72 |
| WP_215117686.1 | hydroxyisourate hydrolase [Streptomyces sp. MG62] >gb
| 556 | 9.2e-72 |
| WP_102913562.1 | hydroxyisourate hydrolase [Streptomyces cahuitamycinicus] >g...
| 553 | 2.5e-71 |
| WP_184555709.1 | hydroxyisourate hydrolase [Streptomyces paradoxus] >lcl
| 552 | 4.8e-71 |
| WP_067285308.1 | hydroxyisourate hydrolase [Streptomyces jeddahensis] >gb
| 548 | 1.6e-70 |
| WP_193503518.1 | hydroxyisourate hydrolase [Streptomyces bellus] >dbj
| 548 | 1.8e-70 |
| WP_062929900.1 | hydroxyisourate hydrolase [Streptomyces qaidamensis] >gb
| 546 | 3.0e-70 |
| EPJ41039.1 | putative Uric acid degradation bifunctional protein TTL [Streptom...
| 545 | 4.2e-70 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1449 | Seems to have no N-terminal signal seq.
|