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IDSAVERM_2035 TypeCDS
From2482710 nt length1269
To2481442 aa length422
Gene pI10.24
Definitionputative secreted protein M.W (Da)45760
Note AseI frg.C
SignalP v.4.0Signal peptide | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6192 hypothetical protein5580.0e+00
sgrSGR_1336 conserved hypothetical protein4732.0e-167
samSAM23877_5924 hypothetical protein5630.0e+00
scabSCAB18671 hypothetical protein5620.0e+00
saceSACE_0696 hypothetical protein3265.0e-110
nfarnfa50830 hypothetical protein2186.0e-58
cglugi|19551621 conserved hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum]371.3e-03

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain91-402249.17.4e-74

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_095937374.1 winged helix DNA-binding domain-containing protein [Streptom... 14960.0e+00
WP_028800628.1 winged helix DNA-binding domain-containing protein [Streptom... 14930.0e+00
WP_128379993.1 winged helix DNA-binding domain-containing protein [Streptom... 14760.0e+00
WP_194083860.1 winged helix DNA-binding domain-containing protein [Streptom... 14740.0e+00
WP_030614576.1 winged helix DNA-binding domain-containing protein [Streptom... 14730.0e+00
OPG03541.1 hypothetical protein B1R27_28420 [Streptomyces sp. GKU 895] 14710.0e+00
WP_126275083.1 winged helix DNA-binding domain-containing protein [Streptom... 14660.0e+00
WP_171400254.1 winged helix DNA-binding domain-containing protein [Streptom... 14630.0e+00
WP_020119009.1 winged helix DNA-binding domain-containing protein [Streptom... 14620.0e+00
WP_189191811.1 winged helix DNA-binding domain-containing protein [Streptom... 14620.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1401 Seems to have no N-terminal signal seq.