| ID | SAVERM_2060
| Type | CDS
|
| From | 2509863
| nt length | 765
|
| To | 2510627
| aa length | 254
|
| Gene |
| pI | 9.95
|
| Definition | putative polysaccharide deacetylase, secreted
| M.W (Da) | 27809
|
| Note | PF01522: Polysaccharide deacetylase
| AseI frg. | C
|
| SignalP v.4.0 | Signal peptide | plot
| Category | cell wall
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6178 putative deacetylase | 369 | 4.0e-131
|
| sgr | SGR_2221 putative deacetylase | 331 | 3.0e-116
|
| sam | SAM23877_5909 Deacetylase | 369 | 5.0e-131
|
| scab | SCAB43191 putative polysaccharide deacetylase, secreted | 169 | 8.0e-53
|
| nfar | nfa52640 polysaccharide deacetylase | 115 | 3.7e-27
|
| mtub | gi|15608236 POSSIBLE GLYCOSYL HYDROLASE [Mycobacterium tuberculosis H37Rv] | 144 | 7.5e-36
|
| cglu | gi|19552478 COG0614:ABC-type cobalamin/Fe3+-siderophores transport systems, periplasmic components [Corynebacterium glutamicum] | 33 | 1.3e-02
|
| bsub | BG13184 yjeA; similar to endo-1,4-beta-xylanase | 129 | 1.7e-31
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Polysacc_deac_1 | 1 | Polysaccharide deacetylase | 56-174 | 137.0 | 2.7e-40
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_028800642.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 998 | 3.5e-135 |
| WP_095937361.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 994 | 1.6e-134 |
| WP_171144201.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 993 | 2.2e-134 |
| QIY77330.1 | polysaccharide deacetylase family protein [Streptomyces sp. RLB1-...
| 982 | 9.4e-133 |
| WP_211118846.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 982 | 1.3e-132 |
| WP_067375969.1 | polysaccharide deacetylase family protein [Streptomyces oliv...
| 981 | 1.4e-132 |
| WP_181652741.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 981 | 1.5e-132 |
| WP_223284036.1 | MULTISPECIES: polysaccharide deacetylase family protein [Str...
| 980 | 2.2e-132 |
| WP_212726721.1 | polysaccharide deacetylase family protein [Streptomyces mira...
| 979 | 3.7e-132 |
| WP_054236983.1 | polysaccharide deacetylase family protein [Streptomyces sp. ...
| 978 | 3.8e-132 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | May be a lipoprotein
|