| ID | SAVERM_2067
| Type | CDS
|
| From | 2519729
| nt length | 2382
|
| To | 2517348
| aa length | 793
|
| Gene | pucB
| pI | 5.55
|
| Definition | putative xanthine dehydrogenase
| M.W (Da) | 84527
|
| Note | PF02738: Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain
| AseI frg. | C
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6172 putative oxidoreductase | 1407 | 0.0e+00
|
| sgr | SGR_1353 putative xanthine dehydrogenase | 1463 | 0.0e+00
|
| sam | SAM23877_5904 putative Xanthine dehydrogenase | 1484 | 0.0e+00
|
| scab | SCAB19241 putative xanthine dehydrogenase | 1504 | 0.0e+00
|
| sace | SACE_1261 aldehyde oxidase and xanthine dehydrogenase,molybdopterin binding | 921 | 0.0e+00
|
| mtub | gi|15607514 PROBABLE CARBON MONOXYDE DEHYDROGENASE (LARGE CHAIN) [Mycobacterium tuberculosis H37Rv] | 217 | 2.1e-57
|
| bsub | BG13989 pucD, yurC; xanthine dehydrogenase | 369 | 4.9e-103
|
| ecoli | gi|16130768 putative xanthine dehydrogenase subunit, molybdemum cofactor-binding domain [Escherichia coli K12] | 286 | 2.8e-78
|
| paer | PA1523 [gene=xdhB] [prot=xanthine dehydrogenase] [comment=PA1523] | 200 | 3.6e-52
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ald_Xan_dh_C2 | 1 | Molybdopterin-binding domain of aldehyde dehydrogenase | 172-735 | 486.9 | 6.2e-146
|
| Ald_Xan_dh_C | 1 | Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | 34-141 | 128.5 | 1.2e-37
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_095851939.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. Ag8...
| 3889 | 0.0e+00 |
| WP_097224432.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. OV1...
| 3889 | 0.0e+00 |
| WP_067375646.1 | molybdopterin-dependent oxidoreductase [Streptomyces olivoch...
| 3880 | 0.0e+00 |
| WP_030940397.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. NRR...
| 3877 | 0.0e+00 |
| QIY99031.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. S1D4-11]
| 3877 | 0.0e+00 |
| WP_075031100.1 | molybdopterin-dependent oxidoreductase [Streptomyces mirabil...
| 3876 | 0.0e+00 |
| WP_217565998.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. Gbt...
| 3875 | 0.0e+00 |
| WP_190171531.1 | molybdopterin-dependent oxidoreductase [Streptomyces mirabil...
| 3874 | 0.0e+00 |
| WP_168496964.1 | MULTISPECIES: molybdopterin-dependent oxidoreductase [Strept...
| 3873 | 0.0e+00 |
| NUQ98801.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp.]
| 3872 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1087 | Seems to have no N-terminal signal seq.
|