-- | --

IDSAVERM_2119 TypeCDS
From2585353 nt length714
To2584640 aa length237
Gene pI10.82
Definitionputative AraC-family transcriptional regulator M.W (Da)25358
NotePF00165: Bacterial regulatory helix-turn-helix proteins, AraC family AseI frg.C
SignalP v.4.0Non-secretory protein | plot Categoryregulation

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6119 putative AraC family transcriptional regulator2654.0e-91
sgrSGR_1386 putative AraC-family transcriptional regulator2344.0e-78
samSAM23877_5831 putative HTH-type transcriptional regulator in mcrB 3'region2992.0e-104
scabSCAB19661 putative AraC-family transcriptional regulator2713.0e-93
saceSACE_1408 AraC family transcriptional regulator1154.0e-32
nfarnfa44620 transcriptional regulator2661.6e-72

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain160-23751.86.6e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529258.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9761.4e-132
WP_200418272.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8182.4e-108
WP_103838780.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 8088.9e-107
WP_071367489.1 helix-turn-helix transcriptional regulator [Streptomyces col... 8036.1e-106
WP_099499041.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7923.8e-104
WP_141574773.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 7843.3e-103
WP_048820102.1 helix-turn-helix domain-containing protein [Streptomyces ipo... 7824.9e-103
WP_095748535.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7826.7e-103
EKX67084.1 hypothetical protein STRIP9103_07885 [Streptomyces ipomoeae 91-03... 7811.1e-102
WP_190194051.1 helix-turn-helix transcriptional regulator [Streptomyces min... 7792.4e-102

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.2135 Seems to have no N-terminal signal seq.