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IDSAVERM_2178 TypeCDS
From2651343 nt length1005
To2650339 aa length334
GeneopuBC1 pI8.14
Definitionputative ABC transporter substrate-binding protein M.W (Da)34624
Noteosmoprotectant transport system substrate-binding protin, PF04069: Substrate binding domain of ABC-type glycine betaine transport system AseI frg.O
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6065 putative secreted substrate-binding protein4341.0e-154
samSAM23877_5780 Secreted substrate-binding protein4428.0e-158
scabSCAB81811 putative ABC transporter substrate-binding protein2452.0e-80
saceSACE_6409 putative ABC transport system substrate binding component1931.0e-60
mtubgi|15610895 POSSIBLE OSMOPROTECTANT (GLYCINE BETAINE/CARNITINE/CHOLINE/L-PROLINE) BINDING LIPOPROTEIN PROX [Mycobacterium tuberculosis H37Rv]1831.2e-47

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system66-329185.41.3e-54

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_200418342.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11705.2e-159
WP_199836097.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11592.1e-157
WP_103838832.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11584.5e-157
WP_111003510.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11462.3e-155
WP_046591991.1 ABC transporter substrate-binding protein [Streptomyces mang... 11445.5e-155
NEA44797.1 ABC transporter substrate-binding protein [Streptomyces sp. SID10... 11402.4e-154
WP_239146166.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11374.9e-154
WP_071365421.1 ABC transporter substrate-binding protein [Streptomyces colo... 11351.1e-153
WP_169436404.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 11351.7e-153
WP_030381325.1 MULTISPECIES: ABC transporter substrate-binding protein [unc... 11332.0e-153

PSORT result

LocalizationCertaintyPSORT said
membrane0.3187 Seems to have no N-terminal signal seq.