| ID | SAVERM_2208
| Type | CDS
|
| From | 2687531
| nt length | 819
|
| To | 2686713
| aa length | 272
|
| Gene |
| pI | 6.05
|
| Definition | putative hydrolase
| M.W (Da) | 27949
|
| Note | PF01872: RibD C-terminal domain
| AseI frg. | O
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6058 putative hydrolase | 338 | 2.0e-118
|
| sgr | SGR_1458 putative hydrolase | 332 | 3.0e-116
|
| sam | SAM23877_5771 hypothetical protein | 350 | 3.0e-123
|
| scab | SCAB20581 hypothetical protein | 343 | 1.0e-120
|
| sace | SACE_1871 5-amino-6-(5-phosphoribosylamino)uracil reductase | 175 | 6.0e-55
|
| nfar | nfa37320 deaminase/reductase | 157 | 9.4e-40
|
| mtub | gi|15609808 hypothetical protein Rv2671 [Mycobacterium tuberculosis H37Rv] | 149 | 2.6e-37
|
| cglu | gi|19553100 COG1985:Pyrimidine reductase, riboflavin biosynthesis [Corynebacterium glutamicum] | 97 | 8.1e-22
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RibD_C | 1 | RibD C-terminal domain | 54-258 | 103.9 | 9e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_152786505.1 | pyrimidine reductase family protein [Streptomyces phyllanthi...
| 747 | 1.2e-96 |
| WP_189188399.1 | pyrimidine reductase family protein [Streptomyces albiflaves...
| 739 | 2.7e-95 |
| GGN73266.1 | hypothetical protein GCM10011579_051240 [Streptomyces albiflaves...
| 740 | 3.0e-95 |
| WP_217455794.1 | pyrimidine reductase family protein [Streptomyces sp. BV286]...
| 736 | 9.8e-95 |
| WP_093629748.1 | pyrimidine reductase family protein [Streptomyces sp. 3213.3...
| 732 | 2.5e-94 |
| WP_026179508.1 | pyrimidine reductase family protein [Streptomyces hokutonens...
| 731 | 4.5e-94 |
| WP_200715995.1 | pyrimidine reductase family protein [Streptomyces sp. MBT62]...
| 729 | 7.3e-94 |
| WP_201050723.1 | pyrimidine reductase family protein [Streptomyces sp. MBT53]...
| 725 | 3.3e-93 |
| WP_095937249.1 | pyrimidine reductase family protein [Streptomyces sp. Tue602...
| 723 | 6.4e-93 |
| WP_026151414.1 | pyrimidine reductase family protein [Streptomyces prunicolor...
| 721 | 1.2e-92 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1383 | Seems to have no N-terminal signal seq.
|