| ID | SAVERM_2216
| Type | CDS
|
| From | 2695406
| nt length | 774
|
| To | 2696179
| aa length | 257
|
| Gene |
| pI | 4.72
|
| Definition | hypothetical protein
| M.W (Da) | 27603
|
| Note | PF01981: Domain of unknown function UPF0099
| AseI frg. | O
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO6046 hypothetical protein | 379 | 4.0e-135
|
| sgr | SGR_1465 conserved hypothetical protein | 317 | 1.0e-110
|
| sam | SAM23877_5761 hypothetical protein | 340 | 5.0e-120
|
| scab | SCAB20731 hypothetical protein | 342 | 2.0e-120
|
| sace | SACE_1189 hypothetical protein | 147 | 4.0e-44
|
| nfar | nfa42920 hypothetical protein | 161 | 4.6e-41
|
| cglu | gi|19553720 COG1990:Uncharacterized ACR [Corynebacterium glutamicum] | 113 | 7.8e-27
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| PTH2 | 1 | Peptidyl-tRNA hydrolase PTH2 | 172-254 | 38.0 | 1.6e-09
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497873.1 | peptidyl-tRNA hydrolase [Streptomyces sp. SID5469]
| 1116 | 5.7e-153 |
| WP_200418366.1 | peptidyl-tRNA hydrolase [Streptomyces sp. Y2F8-2] >dbj
| 970 | 3.9e-131 |
| WP_067375498.1 | MULTISPECIES: peptidyl-tRNA hydrolase [Streptomyces] >gb
| 965 | 3.8e-130 |
| QIY98871.1 | peptidyl-tRNA hydrolase [Streptomyces sp. S1D4-11]
| 965 | 4.0e-130 |
| GHD70772.1 | peptidyl-tRNA hydrolase [Streptomyces mirabilis]
| 962 | 1.3e-129 |
| WP_217566127.1 | peptidyl-tRNA hydrolase [Streptomyces sp. GbtcB7]
| 962 | 2.0e-129 |
| WP_190173042.1 | peptidyl-tRNA hydrolase [Streptomyces mirabilis]
| 961 | 2.4e-129 |
| WP_215158673.1 | MULTISPECIES: peptidyl-tRNA hydrolase [unclassified Streptom...
| 959 | 2.8e-129 |
| WP_168496649.1 | MULTISPECIES: peptidyl-tRNA hydrolase [Streptomyces] >gb
| 959 | 2.8e-129 |
| WP_167459055.1 | MULTISPECIES: peptidyl-tRNA hydrolase [Streptomyces] >gb
| 957 | 3.5e-129 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0957 | Seems to have no N-terminal signal seq.
|