-- | --

IDSAVERM_2305 TypeCDS
From2808242 nt length399
To2807844 aa length132
Gene pI4.84
Definitionhypothetical protein M.W (Da)14043
NotePF01042: Endoribonuclease L-PSP AseI frg.M
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5985 conserved hypothetical protein2182.0e-75
sgrSGR_1562 putative endoribonuclease2061.0e-70
samSAM23877_5699 hypothetical protein2168.0e-75
scabSCAB87891 putative endoribonuclease1274.0e-39
saceSACE_3136 putative endoribonuclease, translation initiation1639.0e-54
nfarnfa12420 endoribonuclease1443.3e-36

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribonuc_L-PSP1Endoribonuclease L-PSP12-13063.61.5e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168534147.1 RidA family protein [Streptomyces sp. RPA4-2] >gb 5324.0e-68
QIY98833.1 RidA family protein [Streptomyces sp. S1D4-11] 5272.2e-67
WP_075030547.1 RidA family protein [Streptomyces mirabilis] >dbj 5272.4e-67
WP_217566161.1 RidA family protein [Streptomyces sp. GbtcB7] 5255.4e-67
WP_143603173.1 MULTISPECIES: RidA family protein [unclassified Streptomyces... 5246.2e-67
WP_030313975.1 RidA family protein [Streptomyces sp. NRRL B-3229] 5231.1e-66
WP_054234033.1 MULTISPECIES: RidA family protein [unclassified Streptomyces... 5212.0e-66
WP_143656037.1 RidA family protein [Streptomyces sp. S1A1-7] >gb 5202.8e-66
WP_097269896.1 RidA family protein [Streptomyces sp. TLI_55] >emb 5203.1e-66
WP_153288110.1 RidA family protein [Streptomyces fagopyri] >gb 5203.2e-66

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1589 Seems to have no N-terminal signal seq.