| ID | SAVERM_2330
| Type | CDS
|
| From | 2835881
| nt length | 4059
|
| To | 2839939
| aa length | 1352
|
| Gene | narB
| pI | 5.46
|
| Definition | putative assimilatory nitrate reductase large subunit
| M.W (Da) | 145945
|
| Note | PF00384: Molybdopterin oxidoreductase
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO7374 putative oxidoreductase | 358 | 2.0e-107
|
| sgr | SGR_6233 putative assimilatory nitrate reductase large subunit | 1901 | 0.0e+00
|
| sam | SAM23877_2527 Assimilatory nitrate reductase catalytic subunit | 413 | 4.0e-129
|
| scab | SCAB23291 putative assimilatory nitrate reductase large subunit | 2182 | 0.0e+00
|
| nfar | nfa51300 hypothetical protein | 1595 | 0.0e+00
|
| bsub | BG14100 yvgR; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] | 421 | 1.9e-118
|
| ecoli | gi|16130671 sulfite reductase (NADPH), flavoprotein beta subunit [Escherichia coli K12] | 367 | 2.9e-102
|
| paer | PA1779 [gene=PA1779] [prot=assimilatory nitrate reductase] [comment=PA1779] | 545 | 1.1e-155
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Molybdopterin | 1 | Molybdopterin oxidoreductase | 95-504 | 237.4 | 2.7e-70
|
| Molydop_binding | 1 | Molydopterin dinucleotide binding domain | 600-711 | 126.1 | 5.7e-37
|
| FAD_binding_1 | 1 | FAD binding domain | 984-1178 | 109.7 | 1.4e-31
|
| Flavodoxin_1 | 1 | Flavodoxin | 829-947 | 101.8 | 3.4e-29
|
| Molybdop_Fe4S4 | 1 | Molybdopterin oxidoreductase Fe4S4 domain | 15-69 | 56.2 | 2.3e-15
|
| NAD_binding_1 | 1 | Oxidoreductase NAD-binding domain | 1210-1316 | 55.3 | 7.9e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_103839214.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5794 | 0.0e+00 |
| WP_062701174.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5782 | 0.0e+00 |
| WP_067034563.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5776 | 0.0e+00 |
| QIY98813.1 | molybdopterin-dependent oxidoreductase [Streptomyces sp. S1D4-11]
| 5768 | 0.0e+00 |
| WP_200418425.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5756 | 0.0e+00 |
| WP_190051770.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5753 | 0.0e+00 |
| WP_031480544.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5751 | 0.0e+00 |
| WP_062148848.1 | bifunctional nitrate reductase/sulfite reductase flavoprotei...
| 5744 | 0.0e+00 |
| GGX07303.1 | bifunctional reductase [Streptomyces lomondensis]
| 5744 | 0.0e+00 |
| WP_215158543.1 | MULTISPECIES: bifunctional nitrate reductase/sulfite reducta...
| 5739 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2953 | Seems to have no N-terminal signal seq.
|