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IDSAVERM_2340 TypeCDS
From2854441 nt length393
To2854833 aa length130
Gene pI6.26
Definitionputative substrate-binding protein M.W (Da)13854
NotePF03459: TOBE domain AseI frg.M
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3703 putative substrate binding protein2412.0e-84
sgrSGR_3499 putative substrate-binding protein2282.0e-79
samSAM23877_1431 putative substrate-binding protein2311.0e-80
scabSCAB38751 putative substrate-binding protein2294.0e-80

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TOBE1TOBE domain65-12760.71.2e-16

HTH_171Helix-turn-helix domain4-4943.91.8e-11

MerR1MerR family regulatory protein5-4038.18.6e-10

MerR_11MerR HTH family regulatory protein4-4828.51.1e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_064537234.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5653.5e-73
WP_055613660.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 5645.3e-73
GHD68460.1 MerR family transcriptional regulator [Streptomyces mirabilis] 5611.8e-72
WP_054234136.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 5601.8e-72
WP_168493788.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 5593.3e-72
WP_030921540.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5584.1e-72
WP_143640844.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5574.6e-72
WP_062648589.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5567.5e-72
WP_053667122.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 5568.7e-72
WP_164588250.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 5551.1e-71

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1996 Seems to have no N-terminal signal seq.