| ID | SAVERM_2398
| Type | CDS
|
| From | 2926780
| nt length | 765
|
| To | 2926016
| aa length | 254
|
| Gene |
| pI | 4.17
|
| Definition | hypothetical protein
| M.W (Da) | 27149
|
| Note | PF12502: Protein of unknown function (DUF3710)
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5869 hypothetical protein | 442 | 2.0e-160
|
| sgr | SGR_1663 conserved hypothetical protein | 404 | 3.0e-145
|
| sam | SAM23877_5569 hypothetical protein | 421 | 1.0e-151
|
| scab | SCAB24011 hypothetical protein | 416 | 2.0e-149
|
| sace | SACE_1808 hypothetical protein | 98 | 1.0e-25
|
| nfar | nfa37520 hypothetical protein | 97 | 1.1e-21
|
| mtub | gi|15609833 CONSERVED HYPOTHETICAL ALANINE AND GLYCINE AND VALINE RICH PROTEIN [Mycobacterium tuberculosis H37Rv] | 94 | 5.2e-21
|
| cglu | gi|19553108 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 83 | 8.5e-18
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| DUF3710 | 1 | Protein of unknown function (DUF3710) | 48-221 | 207.9 | 8.2e-62
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099503800.1 | MULTISPECIES: DUF3710 domain-containing protein [Streptomyce...
| 1002 | 9.8e-136 |
| WP_202497371.1 | DUF3710 domain-containing protein [Streptomyces sp. SID5469]
| 1004 | 1.0e-135 |
| WP_028802252.1 | MULTISPECIES: DUF3710 domain-containing protein [unclassifie...
| 996 | 6.3e-135 |
| WP_037620039.1 | DUF3710 domain-containing protein [Streptomyces aureus]
| 996 | 7.4e-135 |
| NEB34379.1 | DUF3710 domain-containing protein [Streptomyces sp. SID14446]
| 996 | 8.0e-135 |
| WP_151468712.1 | DUF3710 domain-containing protein [Streptomyces triticiradic...
| 995 | 8.8e-135 |
| WP_101401168.1 | MULTISPECIES: DUF3710 domain-containing protein [Streptomyce...
| 994 | 1.2e-134 |
| WP_081219854.1 | DUF3710 domain-containing protein [Streptomyces sp. M41(2017...
| 994 | 1.3e-134 |
| WP_189188273.1 | DUF3710 domain-containing protein [Streptomyces albiflavesce...
| 994 | 1.6e-134 |
| WP_054229932.1 | MULTISPECIES: DUF3710 domain-containing protein [Streptomyce...
| 992 | 2.5e-134 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1171 | Seems to have no N-terminal signal seq.
|