| ID | SAVERM_2430
| Type | CDS
|
| From | 2961753
| nt length | 1728
|
| To | 2963480
| aa length | 575
|
| Gene | dcuS
| pI | 5.33
|
| Definition | putative two-component system sensor kinase
| M.W (Da) | 61484
|
| Note | Tat substrate, PF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | sensors
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5829 putative two-component sensor | 858 | 0.0e+00
|
| sgr | SGR_1694 putative two-component system sensor kinase | 720 | 0.0e+00
|
| sam | SAM23877_5535 Two-component sensor | 824 | 0.0e+00
|
| scab | SCAB24351 putative two-component system sensor kinase | 874 | 0.0e+00
|
| sace | SACE_1976 putative two-component system sensor kinase | 333 | 2.0e-108
|
| cglu | gi|19551318 COG3290:Signal transduction histidine kinase regulating citrate/malate metabolism [Corynebacterium glutamicum] | 254 | 9.9e-69
|
| bsub | BG12347 yufL; two-component sensor histidine kinase. potential cognate response regulator is YufM | 249 | 3.0e-67
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| sCache_3_2 | 1 | Single cache domain 3 | 47-178 | 78.9 | 3.5e-22
|
| HATPase_c | 1 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 423-532 | 75.7 | 3.8e-21
|
| SPOB_a | 1 | Sensor_kinase_SpoOB-type, alpha-helical domain | 327-375 | 35.9 | 4.2e-09
|
| HATPase_c_5 | 1 | GHKL domain | 424-521 | 32.5 | 5.7e-08
|
| PAS | 1 | PAS fold | 225-270 | 32.1 | 8.6e-08
|
| PAS_8 | 1 | PAS domain | 227-273 | 27.9 | 1.6e-06
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.2678 | Seems to have a cleavable N-term signal seq.
|