| ID | SAVERM_2462
| Type | CDS
|
| From | 3004149
| nt length | 564
|
| To | 3003586
| aa length | 187
|
| Gene | nrdR
| pI | 5
|
| Definition | putative regulatory protein
| M.W (Da) | 20616
|
| Note | PF03477: ATP cone domain
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5804 hypothetical protein | 309 | 8.0e-110
|
| sgr | SGR_1716 conserved hypothetical protein | 303 | 1.0e-107
|
| sam | SAM23877_5507 Transcriptional repressor NrdR | 315 | 3.0e-112
|
| scab | SCAB24641 putative regulatory protein | 332 | 9.0e-119
|
| sace | SACE_1763 ribonucleotide reductase regulator NrdR-like protein | 209 | 2.0e-70
|
| nfar | nfa37980 ATP-binding protein | 219 | 1.2e-58
|
| mtub | gi|15609855 hypothetical protein Rv2718c [Mycobacterium tuberculosis H37Rv] | 219 | 6.8e-59
|
| cglu | gi|19553132 COG1327:Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Corynebacterium glutamicum] | 195 | 9.9e-52
|
| bsub | BG13833 ytcG; hypothetical protein | 128 | 1.8e-31
|
| ecoli | gi|16128398 hypothetical protein b0413 [Escherichia coli K12] | 130 | 4.2e-32
|
| paer | PA4057 [gene=PA4057] [prot=conserved hypothetical protein] [comment=PA4057] | 123 | 9.1e-30
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ATP-cone | 1 | ATP cone domain | 47-131 | 52.2 | 6.3e-14
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_234513622.1 | transcriptional regulator NrdR [Streptomyces glomeratus] >lc...
| 835 | 1.7e-112 |
| WP_055494335.1 | transcriptional regulator NrdR [Streptomyces sp. TP-A0356]
| 829 | 1.1e-111 |
|
| 804 | 9.6e-108 |
| WP_059132093.1 | MULTISPECIES: transcriptional regulator NrdR [unclassified S...
| 802 | 1.8e-107 |
| WP_086755186.1 | MULTISPECIES: transcriptional regulator NrdR [Streptomyces] ...
| 801 | 2.4e-107 |
| WP_103841372.1 | transcriptional regulator NrdR [Streptomyces sp. Ru72] >gb
| 798 | 7.7e-107 |
| WP_152172139.1 | transcriptional regulator NrdR [Streptomyces phaeolivaceus] ...
| 798 | 7.8e-107 |
| WP_151477593.1 | transcriptional regulator NrdR [Streptomyces albicerus]
| 794 | 2.1e-106 |
| WP_200418533.1 | transcriptional regulator NrdR [Streptomyces sp. Y2F8-2] >db...
| 793 | 3.3e-106 |
| WP_095937080.1 | transcriptional regulator NrdR [Streptomyces sp. Tue6028] >g...
| 790 | 1.2e-105 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.5369 | Seems to have no N-terminal signal seq.
|