| ID | SAVERM_2463
| Type | CDS
|
| From | 3004668
| nt length | 780
|
| To | 3005447
| aa length | 259
|
| Gene | lexA
| pI | 7.77
|
| Definition | putative SOS regulatory protein LexA
| M.W (Da) | 28039
|
| Note | PF01726: LexA DNA binding domain
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | regulation
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5803 SOS regulatory protein LexA | 452 | 2.0e-164
|
| sgr | SGR_1717 SOS regulatory protein | 475 | 7.0e-173
|
| sam | SAM23877_5506 LexA repressor | 493 | 5.0e-180
|
| scab | SCAB24651 putative SOS regulatory protein LexA | 503 | 0.0e+00
|
| sace | SACE_1760 SOS-response transcriptional repressor, LexA | 288 | 2.0e-99
|
| nfar | nfa38000 lexA repressor of the SOS regulon | 295 | 2.7e-81
|
| mtub | gi|15609857 LexA repressor [Mycobacterium tuberculosis H37Rv] | 304 | 3.4e-84
|
| cglu | gi|19553134 COG1974:SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Corynebacterium glutamicum] | 253 | 6.4e-69
|
| bsub | BG10678 lexA, dinR; transcriptional repressor of the SOS regulon [EC:3.4.21.88] | 176 | 1.2e-45
|
| ecoli | gi|16131869 LexA repressor [Escherichia coli K12] | 119 | 2.6e-28
|
| paer | PA3007 [gene=lexA] [prot=repressor protein LexA] [comment=PA3007] | 121 | 5.6e-29
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| LexA_DNA_bind | 1 | LexA DNA binding domain | 51-114 | 102.5 | 7e-30
|
| Peptidase_S24 | 1 | Peptidase S24-like | 178-242 | 61.4 | 5.4e-17
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_059132092.1 | MULTISPECIES: transcriptional repressor LexA [unclassified S...
| 1330 | 0.0e+00 |
| WP_234513620.1 | transcriptional repressor LexA [Streptomyces glomeratus] >lc...
| 1327 | 0.0e+00 |
| WP_055494334.1 | transcriptional repressor LexA [Streptomyces sp. TP-A0356]
| 1326 | 0.0e+00 |
| WP_200418534.1 | transcriptional repressor LexA [Streptomyces sp. Y2F8-2] >db...
| 1324 | 0.0e+00 |
| WP_103841370.1 | transcriptional repressor LexA [Streptomyces sp. Ru72] >gb
| 1322 | 0.0e+00 |
|
| 1320 | 0.0e+00 |
| WP_168530554.1 | transcriptional repressor LexA [Streptomyces sp. RPA4-2] >gb...
| 1319 | 0.0e+00 |
| WP_189188217.1 | transcriptional repressor LexA [Streptomyces albiflavescens]...
| 1317 | 0.0e+00 |
| WP_081219793.1 | transcriptional repressor LexA [Streptomyces sp. M41(2017)] ...
| 1317 | 0.0e+00 |
| WP_054229877.1 | MULTISPECIES: transcriptional repressor LexA [Streptomyces] ...
| 1316 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.1213 | Seems to have no N-terminal signal seq.
|