| ID | SAVERM_2486
| Type | CDS
|
| From | 3033795
| nt length | 666
|
| To | 3034460
| aa length | 221
|
| Gene | gluC2
| pI | 9.22
|
| Definition | putative glutamate ABC transporter permease
| M.W (Da) | 23436
|
| Note | gltK, PF00528: Binding-protein-dependent transport system inner membrane component
| AseI frg. | Q
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5775 glutamate permease | 342 | 7.0e-122
|
| sam | SAM23877_5479 Glutamate transport system permease protein GluC | 368 | 6.0e-132
|
| scab | SCAB24901 putative glutamate ABC transporter permease | 336 | 4.0e-119
|
| nfar | nfa38380 glutamate transporter | 276 | 7.9e-76
|
| cglu | gi|19553157 COG0765:ABC-type amino acid transport system, permease component [Corynebacterium glutamicum] | 232 | 9.4e-63
|
| paer | PA1341 [gene=PA1341] [prot=probable permease of ABC transporter] [comment=PA1341] | 114 | 7.1e-27
|
*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| BPD_transp_1 | 1 | Binding-protein-dependent transport system inner membrane component | 30-217 | 42.0 | 7.3e-11
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497912.1 | amino acid ABC transporter permease [Streptomyces sp. SID546...
| 988 | 6.6e-135 |
|
| 976 | 6.1e-133 |
| WP_059132068.1 | MULTISPECIES: amino acid ABC transporter permease [unclassif...
| 973 | 1.7e-132 |
| WP_003997382.1 | amino acid ABC transporter permease [Streptomyces viridochro...
| 968 | 9.5e-132 |
| WP_171399892.1 | amino acid ABC transporter permease [Streptomyces asoensis] ...
| 968 | 9.7e-132 |
|
| 967 | 3.3e-131 |
| WP_125498177.1 | MULTISPECIES: amino acid ABC transporter permease [Streptomy...
| 965 | 3.4e-131 |
| WP_030178221.1 | MULTISPECIES: amino acid ABC transporter permease [Streptomy...
| 965 | 3.7e-131 |
| WP_009307310.1 | amino acid ABC transporter permease [Streptomyces ipomoeae] ...
| 964 | 4.0e-131 |
| WP_037856832.1 | amino acid ABC transporter permease [Streptomyces sp. NRRL S...
| 963 | 5.4e-131 |
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4885 | Seems to have no N-terminal signal seq.
|