| ID | SAVERM_2517
| Type | CDS
|
| From | 3083035
| nt length | 741
|
| To | 3082295
| aa length | 246
|
| Gene | thyX
| pI | 6.26
|
| Definition | putative thymidylate synthase
| M.W (Da) | 28001
|
| Note | PF02511: Thymidylate synthase complementing protein
| AseI frg. | V
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of nucleotides & nucleic acids
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5743 hypothetical protein | 454 | 3.0e-165
|
| sgr | SGR_1777 putative thymidylate synthase complementing protein | 440 | 9.0e-160
|
| sam | SAM23877_5445 Thymidylate synthase ThyX | 458 | 8.0e-167
|
| scab | SCAB25201 putative thymidylate synthase | 288 | 1.0e-95
|
| mtub | gi|15609891 thymidylate synthase [Mycobacterium tuberculosis H37Rv] | 45 | 4.6e-06
|
| cglu | gi|19553176 COG1351:Predicted alternative thymidylate synthase [Corynebacterium glutamicum] | 40 | 1.0e-04
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Thy1 | 1 | Thymidylate synthase complementing protein | 20-232 | 172.6 | 7.2e-51
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_031484840.1 | FAD-dependent thymidylate synthase [Streptomyces bicolor]
| 1233 | 2.9e-171 |
|
| 1227 | 2.6e-170 |
| WP_048584683.1 | FAD-dependent thymidylate synthase [Streptomyces viridochrom...
| 1226 | 3.9e-170 |
| WP_062725744.1 | FAD-dependent thymidylate synthase [Streptomyces caeruleatus...
| 1225 | 4.7e-170 |
| WP_234535997.1 | FAD-dependent thymidylate synthase [Streptomyces shenzhenens...
| 1224 | 7.7e-170 |
| WP_128435320.1 | FAD-dependent thymidylate synthase [Streptomyces cyaneus]
| 1223 | 1.1e-169 |
| WP_062701886.1 | FAD-dependent thymidylate synthase [Streptomyces regalis] >g...
| 1222 | 1.5e-169 |
| WP_015657476.1 | FAD-dependent thymidylate synthase [Streptomyces davaonensis...
| 1221 | 2.4e-169 |
| WP_067035163.1 | FAD-dependent thymidylate synthase [Streptomyces dysideae] >...
| 1220 | 3.2e-169 |
|
| 1219 | 3.5e-169 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2130 | Seems to have no N-terminal signal seq.
|