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IDSAVERM_2520 TypeCDS
From3084691 nt length453
To3084239 aa length150
Gene pI10.27
Definitionputative membrane protein M.W (Da)16600
NotePF00515: TPR Domain AseI frg.V
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5740 putative membrane protein2688.0e-95
sgrSGR_1780 putative membrane protein2544.0e-89
samSAM23877_5442 hypothetical protein2702.0e-95
scabSCAB25221 putative membrane protein2651.0e-93
saceSACE_5911 tetratricopeptide TPR_2 repeat protein952.0e-26
nfarnfa38800 hypothetical protein982.1e-22
mtubgi|15609909 PROBABLE CONSERVED TRANSMEMBRANE PROTEIN [Mycobacterium tuberculosis H37Rv]973.6e-22

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_037626401.1 membrane protein [Streptomyces aureus] 5702.6e-73
WP_151474859.1 hypothetical protein [Streptomyces triticiradicis] >lcl 5676.9e-73
WP_103552227.1 hypothetical protein [Streptomyces populi] >gb 5642.1e-72
WP_099920356.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 5624.9e-72
WP_099502528.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 5614.9e-72
WP_062725738.1 tetratricopeptide repeat protein [Streptomyces caeruleatus] ... 5616.7e-72
WP_067371309.1 hypothetical protein [Streptomyces olivochromogenes] >gb 5608.9e-72
WP_151481663.1 hypothetical protein [Streptomyces albicerus] 5591.2e-71
WP_067301625.1 tetratricopeptide repeat protein [Streptomyces griseochromog... 5591.3e-71
WP_168496258.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 5591.4e-71

PSORT result

LocalizationCertaintyPSORT said
membrane0.4333 Seems to have an uncleavable N-term signal seq