| ID | SAVERM_2524
| Type | CDS
|
| From | 3089701
| nt length | 288
|
| To | 3089414
| aa length | 95
|
| Gene | rpsO
| pI | 11.56
|
| Definition | putative ribosomal protein S15
| M.W (Da) | 10768
|
| Note | PF00312: Ribosomal protein S15
| AseI frg. | V
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5736 30S ribosomal protein S15 | 182 | 1.0e-62
|
| sgr | SGR_1784 putative 30S ribosomal protein S15 | 177 | 2.0e-60
|
| sam | SAM23877_5438 30S ribosomal subunit protein S15 | 182 | 1.0e-62
|
| scab | SCAB25261 putative ribosomal protein S15 | 189 | 5.0e-65
|
| sace | SACE_5915 30S ribosomal protein S15 | 123 | 2.0e-39
|
| nfar | nfa38880 rpsO ribosomal protein S15 | 122 | 4.6e-30
|
| mtub | gi|15609922 30S ribosomal protein S15 [Mycobacterium tuberculosis H37Rv] | 127 | 1.8e-31
|
| cglu | gi|19553180 COG0184:Ribosomal protein S15P/S13E [Corynebacterium glutamicum] | 120 | 9.0e-30
|
| bsub | BG19010 rpsO; 30S ribosomal protein S15 | 112 | 3.1e-27
|
| ecoli | gi|16131057 30S ribosomal protein S15 [Escherichia coli K12] | 100 | 1.4e-23
|
| paer | PA4741 [gene=rpsO] [prot=30S ribosomal protein S15] [comment=PA4741] | 104 | 1.0e-24
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_S15 | 1 | Ribosomal protein S15 | 8-88 | 126.1 | 4.4e-37
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_217234539.1 | 30S ribosomal protein S15 [Streptomyces sp. AC555_RSS877]
| 476 | 8.1e-61 |
| WP_030041128.1 | MULTISPECIES: 30S ribosomal protein S15 [Streptomyces] >lcl
| 476 | 8.8e-61 |
| WP_069766575.1 | 30S ribosomal protein S15 [Streptomyces sp. LUP47B]
| 476 | 9.9e-61 |
| WP_020138875.1 | MULTISPECIES: 30S ribosomal protein S15 [Streptomyces] >gb
| 475 | 1.4e-60 |
| WP_100571636.1 | 30S ribosomal protein S15 [Streptomyces sp. CB01373] >gb
| 475 | 1.4e-60 |
| WP_089098391.1 | MULTISPECIES: 30S ribosomal protein S15 [Streptomyces] >dbj
| 475 | 1.6e-60 |
| WP_073949078.1 | 30S ribosomal protein S15 [Streptomyces kebangsaanensis]
| 475 | 1.6e-60 |
| WP_046913577.1 | MULTISPECIES: 30S ribosomal protein S15 [Streptomyces] >gb
| 475 | 1.6e-60 |
| WP_130444864.1 | 30S ribosomal protein S15 [Streptomyces sp. BK239] >gb
| 474 | 1.8e-60 |
| WP_030945091.1 | MULTISPECIES: 30S ribosomal protein S15 [Streptomyces] >gb
| 474 | 2.1e-60 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3823 | Seems to have no N-terminal signal seq.
|