-- | --

IDSAVERM_2591 TypeCDS
From3185348 nt length1248
To3184101 aa length415
GenepotD2 pI5.75
Definitionputative polyamine ABC transporter substrate-binding protein M.W (Da)45504
NoteTat substrate, PF01547: Bacterial extracellular solute-binding protein AseI frg.J
SignalP v.4.0Non-secretory protein | plot Categorytransport / binding proteins & lipoproteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5667 putative ABC-transporter polyamine-binding lipop rotein6770.0e+00
sgrSGR_1837 putative polyamine ABC transporter substrate-binding protein6230.0e+00
samSAM23877_5393 Putrescine ABC transporter putrescine-binding protein PotF7060.0e+00
scabSCAB25761 putative polyamine ABC transporter substrate-binding protein7020.0e+00
ecoligi|16128822 periplasmic putrescine-binding protein; permease protein [Escherichia coli K12]1149.1e-27
paerPA0301 [gene=potF3] [prot=polyamine transport protein] [comment=PA0301]1141.3e-26

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein99-366117.49.9e-34

SBP_bac_61Bacterial extracellular solute-binding protein138-37686.41.8e-24

SBP_bac_11Bacterial extracellular solute-binding protein96-34456.44.2e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_168496124.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 18690.0e+00
WP_153288301.1 spermidine/putrescine ABC transporter substrate-binding prot... 18620.0e+00
WP_168530465.1 spermidine/putrescine ABC transporter substrate-binding prot... 18620.0e+00
WP_191876427.1 spermidine/putrescine ABC transporter substrate-binding prot... 18390.0e+00
WP_228623069.1 spermidine/putrescine ABC transporter substrate-binding prot... 18360.0e+00
WP_189926518.1 spermidine/putrescine ABC transporter substrate-binding prot... 18320.0e+00
WP_061930429.1 spermidine/putrescine ABC transporter substrate-binding prot... 18310.0e+00
WP_200727975.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 18300.0e+00
WP_067008676.1 spermidine/putrescine ABC transporter substrate-binding prot... 18290.0e+00
WP_123967784.1 spermidine/putrescine ABC transporter substrate-binding prot... 18280.0e+00

PSORT result

LocalizationCertaintyPSORT said
membrane0.1150 Seems to have no N-terminal signal seq.