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IDSAVERM_2609 TypeCDS
From3207868 nt length1191
To3206678 aa length396
Gene pI5.17
Definitionputative ABC transporter substrate-binding protein M.W (Da)44097
NoteTat substrate, PF01547: Bacterial extracellular solute-binding protein AseI frg.J
SignalP v.4.0Signal peptide | plot Categorytransport / binding proteins & lipoproteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO5658 putative polyamine-binding lipoprotein7020.0e+00
sgrSGR_1844 putative polyamine ABC transporter substrate-binding protein6450.0e+00
samSAM23877_5387 Polyamine-binding lipoprotein6910.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein78-35094.97e-27

SBP_bac_61Bacterial extracellular solute-binding protein117-34775.63.5e-21

SBP_bac_11Bacterial extracellular solute-binding protein69-32528.99.7e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_237529309.1 spermidine/putrescine ABC transporter substrate-binding prot... 18710.0e+00
WP_229703440.1 spermidine/putrescine ABC transporter substrate-binding prot... 17540.0e+00
GGN76560.1 hypothetical protein GCM10011579_057790 [Streptomyces albiflaves... 17490.0e+00
NEB34016.1 spermidine/putrescine ABC transporter substrate-binding protein [... 17340.0e+00
WP_203661534.1 spermidine/putrescine ABC transporter substrate-binding prot... 17330.0e+00
WP_081219689.1 spermidine/putrescine ABC transporter substrate-binding prot... 17170.0e+00
PBC60955.1 polyamine ABC transporter substrate-binding protein [Streptomyces... 17160.0e+00
WP_179332601.1 spermidine/putrescine ABC transporter substrate-binding prot... 17150.0e+00
WP_126395394.1 spermidine/putrescine ABC transporter substrate-binding prot... 17140.0e+00
WP_031485038.1 spermidine/putrescine ABC transporter substrate-binding prot... 17120.0e+00

PSORT result

LocalizationCertaintyPSORT said
cytoplasm0.1374 Seems to have no N-terminal signal seq.