| ID | SAVERM_2643
| Type | CDS
|
| From | 3240283
| nt length | 240
|
| To | 3240044
| aa length | 79
|
| Gene |
| pI | 9.52
|
| Definition | hypothetical protein
| M.W (Da) | 8683
|
| Note | PF00013: KH domain
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5592 hypothetical protein | 146 | 7.0e-49
|
| sgr | SGR_1888 conserved hypothetical protein | 141 | 8.0e-47
|
| sam | SAM23877_5348 hypothetical protein | 146 | 7.0e-49
|
| scab | SCAB26181 hypothetical protein | 145 | 3.0e-48
|
| sace | SACE_6052 hypothetical protein | 104 | 3.0e-32
|
| nfar | nfa41560 hypothetical protein | 107 | 2.1e-25
|
| mtub | gi|15610045 hypothetical protein Rv2908c [Mycobacterium tuberculosis H37Rv] | 110 | 2.3e-26
|
| bsub | BG13402 ylqC; similar to hypothetical proteins | 62 | 5.2e-12
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| KH_4 | 1 | KH domain | 3-65 | 67.9 | 4.8e-19
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.4608 | Seems to have no N-terminal signal seq.
|