| ID | SAVERM_2649
| Type | CDS
|
| From | 3248602
| nt length | 2460
|
| To | 3246143
| aa length | 819
|
| Gene | glnD
| pI | 6.08
|
| Definition | putative protein P-II uridylyltransferase
| M.W (Da) | 90905
|
| Note | PF08335: GlnD PII-uridylyltransferase
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5585 putative protein pII uridylyltransferase | 1189 | 0.0e+00
|
| sgr | SGR_1893 putative protein P-II uridylyltransferase | 1107 | 0.0e+00
|
| sam | SAM23877_5341 Bifunctional uridylyltransferase/uridylyl-removing enzyme | 1246 | 0.0e+00
|
| scab | SCAB26241 putative protein P-II uridylyltransferase | 1308 | 0.0e+00
|
| nfar | nfa41620 glnD protein PII uridylyltransferase | 561 | 8.0e-161
|
| mtub | gi|15610055 PII uridylyl-transferase [Mycobacterium tuberculosis H37Rv] | 523 | 1.8e-149
|
| cglu | gi|19553260 COG2844:UTP:GlnB (protein PII) uridylyltransferase [Corynebacterium glutamicum] | 282 | 5.2e-77
|
| ecoli | gi|16128160 PII uridylyl-transferase [Escherichia coli K12] | 211 | 2.0e-55
|
| paer | PA3658 [gene=glnD] [prot=protein-PII uridylyltransferase] [comment=PA3658] | 229 | 7.9e-61
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GlnD_UR_UTase | 1 | GlnD PII-uridylyltransferase | 210-284 | 50.9 | 1.5e-13
|
| HD | 1 | HD domain | 435-522 | 48.8 | 6.7e-13
|
| ACT | 1 | ACT domain | 748-795 | 47.1 | 1.3e-12
|
| NTP_transf_2 | 1 | Nucleotidyltransferase domain | 62-121 | 22.0 | 0.00014
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_028802443.1 | [protein-PII] uridylyltransferase [Streptomyces sp. 142MFCol...
| 3167 | 0.0e+00 |
| WP_143640661.1 | [protein-PII] uridylyltransferase [Streptomyces sp. IB201691...
| 3155 | 0.0e+00 |
| WP_099920459.1 | [protein-PII] uridylyltransferase [Streptomyces sp. GbtcB7]
| 3154 | 0.0e+00 |
| WP_190172479.1 | [protein-PII] uridylyltransferase [Streptomyces mirabilis] >...
| 3152 | 0.0e+00 |
| WP_151483559.1 | [protein-PII] uridylyltransferase, partial [Streptomyces alb...
| 3151 | 0.0e+00 |
| WP_075031219.1 | [protein-PII] uridylyltransferase [Streptomyces mirabilis] >...
| 3147 | 0.0e+00 |
| WP_095936909.1 | [protein-PII] uridylyltransferase [Streptomyces sp. Tue6028]...
| 3146 | 0.0e+00 |
| WP_037625085.1 | [protein-PII] uridylyltransferase [Streptomyces aureus]
| 3144 | 0.0e+00 |
| WP_097224664.1 | [protein-PII] uridylyltransferase [Streptomyces sp. OV198] >...
| 3142 | 0.0e+00 |
| WP_200395642.1 | [protein-PII] uridylyltransferase [Streptomyces sp. ZYC-3] >...
| 3142 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.3385 | Seems to have no N-terminal signal seq.
|