| ID | SAVERM_2651
| Type | CDS
|
| From | 3250300
| nt length | 1341
|
| To | 3248960
| aa length | 446
|
| Gene | amtB1
| pI | 5.87
|
| Definition | putative ammonium transporter
| M.W (Da) | 46337
|
| Note | PF00909: Ammonium Transporter Family
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | transport / binding proteins & lipoproteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5583 ammonium transporter | 736 | 0.0e+00
|
| sgr | SGR_1895 putative ammonium transporter | 716 | 0.0e+00
|
| sam | SAM23877_5339 ammonium transporter | 742 | 0.0e+00
|
| scab | SCAB26261 putative ammonium transporter | 503 | 2.0e-178
|
| sace | SACE_6062 ammonium transporter | 436 | 1.0e-151
|
| nfar | nfa41640 ammonium transporter | 482 | 2.4e-137
|
| mtub | gi|15610057 PROBABLE AMMONIUM-TRANSPORT INTEGRAL MEMBRANE PROTEIN AMT [Mycobacterium tuberculosis H37Rv] | 459 | 1.3e-130
|
| cglu | gi|19553262 COG0004:Ammonia permeases [Corynebacterium glutamicum] | 379 | 1.2e-106
|
| paer | PA5287 [gene=amtB] [prot=ammonium transporter AmtB] [comment=PA5287] | 374 | 7.3e-105
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ammonium_transp | 1 | Ammonium Transporter Family | 21-419 | 417.6 | 3.7e-125
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| membrane | 0.4609 | Seems to have no N-terminal signal seq.
|