| ID | SAVERM_2666
| Type | CDS
|
| From | 3269354
| nt length | 174
|
| To | 3269181
| aa length | 57
|
| Gene | rpmF
| pI | 10.96
|
| Definition | putative ribosomal protein L32
| M.W (Da) | 6588
|
| Note | PF01783: Ribosomal L32p protein family
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | ribosomal protein
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5571 50S ribosomal protein L32 | 118 | 3.0e-38
|
| sgr | SGR_1909 50S ribosomal protein L32 | 115 | 3.0e-37
|
| sace | SACE_6101 ribosomal protein S32, bacterial and organelle form | 87 | 4.0e-26
|
| nfar | nfa41850 rpmF2 ribosomal protein L32 | 84 | 1.6e-18
|
| mtub | gi|57116808 50S ribosomal protein L32 [Mycobacterium tuberculosis H37Rv] | 45 | 6.9e-07
|
| cglu | gi|19552099 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 43 | 2.1e-06
|
| bsub | BG12668 rpmF; 50S ribosomal protein L32 | 52 | 3.4e-09
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L32p | 1 | Ribosomal L32p protein family | 2-56 | 91.9 | 2e-26
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_190059567.1 | 50S ribosomal protein L32 [Streptomyces echinoruber] >dbj
| 297 | 1.5e-34 |
| WP_006139588.1 | MULTISPECIES: 50S ribosomal protein L32 [Streptomyces] >sp
| 296 | 2.2e-34 |
| WP_065965136.1 | MULTISPECIES: 50S ribosomal protein L32 [Streptomyces] >lcl
| 295 | 2.4e-34 |
| WP_073491177.1 | MULTISPECIES: 50S ribosomal protein L32 [Streptomyces] >gb
| 294 | 4.6e-34 |
| WP_125496153.1 | MULTISPECIES: 50S ribosomal protein L32 [Streptomyces] >lcl
| 293 | 4.7e-34 |
|
| 293 | 6.3e-34 |
| WP_030753522.1 | MULTISPECIES: 50S ribosomal protein L32 [Streptomyces] >gb
| 293 | 6.5e-34 |
| WP_030544520.1 | 50S ribosomal protein L32 [Streptomyces albus]
| 292 | 6.6e-34 |
| WP_187746982.1 | 50S ribosomal protein L32 [Streptomyces roseirectus] >gb
| 292 | 7.8e-34 |
| WP_003951102.1 | MULTISPECIES: 50S ribosomal protein L32 [Actinomycetia] >gb
| 292 | 8.7e-34 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2162 | Seems to have no N-terminal signal seq.
|