| ID | SAVERM_2724
| Type | CDS
|
| From | 3342260
| nt length | 927
|
| To | 3341334
| aa length | 308
|
| Gene | putA
| pI | 7.17
|
| Definition | putative proline dehydrogenase
| M.W (Da) | 34235
|
| Note | PF01619: Proline dehydrogenase
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5519 undefined product | 553 | 0.0e+00
|
| sgr | SGR_1989 putative proline dehydrogenase | 556 | 0.0e+00
|
| sam | SAM23877_5269 Proline dehydrogenase | 547 | 0.0e+00
|
| scab | SCAB27001 putative proline dehydrogenase | 548 | 0.0e+00
|
| sace | SACE_1978 proline dehydrogenase | 321 | 1.0e-110
|
| nfar | nfa23550 proline dehydrogenase | 288 | 4.2e-79
|
| mtub | gi|15608328 PROBABLE PROLINE DEHYDROGENASE [Mycobacterium tuberculosis H37Rv] | 285 | 2.7e-78
|
| bsub | BG14025 yusM; similar to proline dehydrogenase | 196 | 1.1e-51
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Pro_dh | 1 | Proline dehydrogenase | 43-301 | 105.7 | 3e-30
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_202497955.1 | proline dehydrogenase family protein [Streptomyces sp. SID54...
| 1451 | 0.0e+00 |
| WP_148010610.1 | proline dehydrogenase family protein [Streptomyces sp. me109...
| 1449 | 0.0e+00 |
| WP_075031613.1 | proline dehydrogenase family protein [Streptomyces mirabilis...
| 1444 | 0.0e+00 |
| WP_189188902.1 | proline dehydrogenase family protein [Streptomyces albiflave...
| 1442 | 0.0e+00 |
| WP_168495816.1 | MULTISPECIES: proline dehydrogenase family protein [Streptom...
| 1441 | 0.0e+00 |
| WP_153288447.1 | proline dehydrogenase family protein [Streptomyces fagopyri]...
| 1441 | 0.0e+00 |
| WP_054234566.1 | MULTISPECIES: proline dehydrogenase family protein [Streptom...
| 1434 | 0.0e+00 |
| WP_067370923.1 | proline dehydrogenase family protein [Streptomyces olivochro...
| 1433 | 0.0e+00 |
| QIY98433.1 | proline dehydrogenase [Streptomyces sp. S1D4-11]
| 1433 | 0.0e+00 |
| WP_143603015.1 | MULTISPECIES: proline dehydrogenase family protein [unclassi...
| 1431 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2375 | Seems to have no N-terminal signal seq.
|