| ID | SAVERM_2749
| Type | CDS
|
| From | 3378738
| nt length | 1008
|
| To | 3377731
| aa length | 335
|
| Gene |
| pI | 5.12
|
| Definition | hypothetical protein
| M.W (Da) | 35117
|
| Note | PF01717: Methionine synthase, vitamin-B12 independent
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | similar to unknown proteins
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5493 hypothetical protein | 559 | 0.0e+00
|
| sgr | SGR_2022 conserved hypothetical protein | 513 | 0.0e+00
|
| sam | SAM23877_5243 hypothetical protein | 572 | 0.0e+00
|
| scab | SCAB27261 hypothetical protein | 553 | 0.0e+00
|
| sace | SACE_6182 methionine synthase, vitamin-B12 independent | 233 | 4.0e-75
|
| nfar | nfa42660 hypothetical protein | 268 | 6.5e-73
|
| mtub | gi|15610152 hypothetical protein Rv3015c [Mycobacterium tuberculosis H37Rv] | 226 | 1.7e-60
|
| cglu | gi|19552462 hypothetical protein, predicted by GeneMark hmm [Corynebacterium glutamicum] | 145 | 2.0e-36
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Meth_synt_2 | 1 | Cobalamin-independent synthase, Catalytic domain | 13-328 | 55.9 | 3.8e-15
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.2423 | Seems to have no N-terminal signal seq.
|