| ID | SAVERM_2750
| Type | CDS
|
| From | 3379543
| nt length | 699
|
| To | 3378845
| aa length | 232
|
| Gene |
| pI | 6.9
|
| Definition | putative dehydrogenase
| M.W (Da) | 24799
|
| Note | PF00106: short chain dehydrogenase
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | miscellaneous
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5492 putative oxidoreductase | 417 | 8.0e-151
|
| sgr | SGR_2023 putative oxidoreductase | 373 | 2.0e-133
|
| sam | SAM23877_5242 putative oxidoreductase | 420 | 3.0e-152
|
| scab | SCAB27271 putative oxidoreductase | 407 | 3.0e-147
|
| sace | SACE_7246 short-chain dehydrogenase/reductase SDR | 188 | 8.0e-61
|
| nfar | nfa55260 short chain dehydrogenase | 169 | 2.5e-43
|
| cglu | gi|19553640 COG1028:Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Corynebacterium glutamicum] | 129 | 1.6e-31
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; cglu, Corynebacterium glutamicum;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| adh_short | 1 | short chain dehydrogenase | 8-192 | 129.4 | 1e-37
|
| adh_short_C2 | 1 | Enoyl-(Acyl carrier protein) reductase | 11-210 | 95.7 | 2.8e-27
|
| KR | 1 | KR domain | 5-166 | 42.7 | 5.2e-11
|
| NAD_binding_10 | 1 | NAD(P)H-binding | 11-216 | 33.6 | 3.1e-08
|
| DUF1776 | 1 | Fungal family of unknown function (DUF1776) | 89-175 | 22.9 | 4.5e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.0805 | Seems to have no N-terminal signal seq.
|