| ID | SAVERM_2773
| Type | CDS
|
| From | 3402270
| nt length | 1119
|
| To | 3403388
| aa length | 372
|
| Gene | gcvT
| pI | 4.82
|
| Definition | putative glycine cleavage system protein T (aminomethyltransferase)
| M.W (Da) | 39087
|
| Note | PF01571: Glycine cleavage T-protein (aminomethyl transferase)
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5472 aminomethyltransferase | 642 | 0.0e+00
|
| sgr | SGR_2045 putative glycine cleavage system protein T | 618 | 0.0e+00
|
| sam | SAM23877_5209 Aminomethyltransferase | 639 | 0.0e+00
|
| scab | SCAB27461 putative glycine cleavage system protein T (aminomethyltransferase) | 591 | 0.0e+00
|
| sace | SACE_5701 putative glycine cleavage system protein T (aminomethyltransferase) | 424 | 4.0e-149
|
| nfar | nfa16960 gcvT glycine cleavage system protein T | 253 | 1.4e-68
|
| mtub | gi|15609348 aminomethyltransferase [Mycobacterium tuberculosis H37Rv] | 250 | 1.2e-67
|
| bsub | BG11509 gcvT, yqhI; aminomethyltransferase [EC:2.1.2.10] | 304 | 4.8e-84
|
| ecoli | gi|16130807 aminomethyltransferase [Escherichia coli K12] | 211 | 4.8e-56
|
| paer | PA5215 [gene=gcvT1] [prot=glycine-cleavage system protein T1] [comment=PA5215] | 224 | 9.8e-60
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GCV_T | 1 | Aminomethyltransferase folate-binding domain | 12-261 | 307.4 | 6.8e-92
|
| GCV_T_C | 1 | Glycine cleavage T-protein C-terminal barrel domain | 269-364 | 84.8 | 3.4e-24
|
| SoxG | 1 | Sarcosine oxidase, gamma subunit family | 111-219 | 26.2 | 6.9e-06
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_099504752.1 | MULTISPECIES: glycine cleavage system aminomethyltransferase...
| 1660 | 0.0e+00 |
| WP_095852494.1 | MULTISPECIES: glycine cleavage system aminomethyltransferase...
| 1645 | 0.0e+00 |
| WP_054234609.1 | MULTISPECIES: glycine cleavage system aminomethyltransferase...
| 1642 | 0.0e+00 |
| WP_095936788.1 | glycine cleavage system aminomethyltransferase GcvT [Strepto...
| 1641 | 0.0e+00 |
| WP_075031570.1 | glycine cleavage system aminomethyltransferase GcvT [Strepto...
| 1640 | 0.0e+00 |
| WP_168495745.1 | MULTISPECIES: glycine cleavage system aminomethyltransferase...
| 1639 | 0.0e+00 |
| WP_028805311.1 | glycine cleavage system aminomethyltransferase GcvT [Strepto...
| 1639 | 0.0e+00 |
| WP_188288996.1 | glycine cleavage system aminomethyltransferase GcvT [Strepto...
| 1638 | 0.0e+00 |
| WP_217568366.1 | glycine cleavage system aminomethyltransferase GcvT [Strepto...
| 1638 | 0.0e+00 |
| QIY98385.1 | glycine cleavage system aminomethyltransferase GcvT [Streptomyces...
| 1638 | 0.0e+00 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | | Seems to have no N-terminal signal seq.
|