| ID | SAVERM_2774
| Type | CDS
|
| From | 3403534
| nt length | 378
|
| To | 3403911
| aa length | 125
|
| Gene | gcvH
| pI | 3.75
|
| Definition | putative glycine cleavage system protein H
| M.W (Da) | 13381
|
| Note | PF01597: Glycine cleavage H-protein
| AseI frg. | J
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category | metabolism of amino acids & related molecules
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| coel | SCO5471 glycine cleavage system H protein | 233 | 1.0e-81
|
| sgr | SGR_2046 putative glycine cleavage system protein H | 235 | 1.0e-82
|
| sam | SAM23877_5208 glycine cleavage complex lipoylprotein | 228 | 1.0e-79
|
| scab | SCAB27481 putative glycine cleavage system protein H | 213 | 1.0e-73
|
| sace | SACE_6378 glycine cleavage system H protein | 153 | 4.0e-50
|
| nfar | nfa24850 gcvH glycine cleavage system protein | 106 | 5.2e-25
|
| mtub | gi|15608963 glycine cleavage system protein H [Mycobacterium tuberculosis H37Rv] | 124 | 1.9e-30
|
| bsub | BG14020 gcvH, yusH; glycine cleavage system protein H | 114 | 1.3e-27
|
| ecoli | gi|16130806 glycine cleavage system protein H [Escherichia coli K12] | 138 | 9.8e-35
|
| paer | PA5214 [gene=gcvH1] [prot=glycine cleavage system protein H1] [comment=PA5214] | 110 | 4.9e-26
|
*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152; mtub, Mycobacterium tuberculosis H37Rv; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12; paer, Pseudomonas aeruginosa;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GCV_H | 1 | Glycine cleavage H-protein | 7-122 | 142.5 | 5e-42
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_215092728.1 | glycine cleavage system protein GcvH [Streptomyces sp. ISL-1...
| 636 | 2.9e-84 |
| WP_151483472.1 | glycine cleavage system protein GcvH [Streptomyces albicerus...
| 632 | 1.5e-83 |
| WP_190037319.1 | glycine cleavage system protein GcvH [Streptomyces fructofer...
| 631 | 1.7e-83 |
| WP_126883543.1 | glycine cleavage system protein GcvH [Streptomyces sp. WAC05...
| 630 | 2.9e-83 |
| WP_084905664.1 | glycine cleavage system protein GcvH [Streptomyces sp. CB032...
| 629 | 3.3e-83 |
| WP_064071740.1 | glycine cleavage system protein GcvH [Streptomyces albulus] ...
| 629 | 3.6e-83 |
| WP_156692188.1 | glycine cleavage system protein GcvH [Streptomyces ficellus]...
| 629 | 4.4e-83 |
| WP_108152721.1 | glycine cleavage system protein GcvH [Streptomyces lunaelact...
| 628 | 5.4e-83 |
| WP_143640549.1 | MULTISPECIES: glycine cleavage system protein GcvH [Streptom...
| 628 | 6.2e-83 |
| WP_142213525.1 | glycine cleavage system protein GcvH [Streptomyces sp. SLBN-...
| 627 | 8.6e-83 |
PSORT result
| Localization | Certainty | PSORT said
|
| cytoplasm | 0.1907 | Seems to have no N-terminal signal seq.
|